| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_49245 |
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| Symbol | |
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| ID | 7195542 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011689 |
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| Strand | + |
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| Start bp | 357103 |
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| End bp | 360733 |
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| Gene Length | 3631 bp |
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| Protein Length | 717 aa |
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| Translation table | |
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| GC content | 55% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002183860 |
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| Protein GI | 219127267 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGACGA CGACGGATAC CGAGACCGTG GACGACAGCA CTACCCACAA TAACATTCTC
GAGCGAGCCT TTCAAACAGC CCGGTATAAC GAAATCGTCA CCGTCACCCT CGAAGATGGC
GTGACGGAAG TCTCGCTTGT GCCGTGCTTG GACGAAACCA ATGGTAACGT CCAGTGGAAT
CCTTTGCCGC TCCCCGACAC AAACTCATCC TCCGTCGATG ACGATGGCAG TGATAACAAC
GAGTCCTTCC GAATAGGCGT GCGGCGACAC CTGCAAACCA AACGGTGGAT ATTCCCCATG
CTTAACGATA CGGTACGGAA CGATTTGTAC CAAAAGGCCA TTGACCGGGC CGTAACGTAT
CTGTCCGGAT CGCAATCGGA GGACACGATG TGGCACGTTT GGGACGTTGG CACCGGCACG
GGGCTGTTGG GGATGATGGC AGCCACGGCA ATCAGGAAAA ATGATCGACC CGATACCGAC
GTCCAACGGA GCCGCGATGG GGGCGTCAAA GTGGTCCGTG CGTTCGAAAT GTCCGCCCCC
ATGGCCATGG TGGCGCGCCA AACGGTTCGG GACAATCATT TAGCCGATCG CGTACACGTC
CACAACGCCC ATTCGGCTCA AATAGCACCA CTCCACGCAA CCCGTGATGC TACTGATCGG
ATGCCCGGCG GCGACGATAT CGACGACGTT TCTACGCGCA CTCCGTCCGT ACTATTGTGT
GTTTCGGAAT TGCTCGAAGA CGGCTTGCTG GGGGAAGGTT GGCTGCCCGC AATACGGGAC
GTCTGGAATC GACATTGGTC ACCACAGTCC CACCACCACT GCCACCATAT GAAGAAAGCA
ATTATTATTC CACAACAGGC CCGTGTATAC GCGCAAGCGG TGACGGCGGA CAACGATTGG
ATCTCCATGT ACTACCCACC GACCCGTCAA CACGGTAACG CCACGTCCAT GTCATTGACT
TTGGATGCAC AGGGCACATC CTTGGTGGAC ATGCCCGTCG TGAGGATTCC CCTACACGCC
CGCACCCTGC TGCATACGCC GGTAGACCCC AACGACTGTA CTCGTCGACC ACCCGCTCTT
CGAGTGCTCT CGGATCCGTT CAAGGCTCTG GATATTTCGG TACAACGGGA CATAATTCCC
GGACCGGAAG GGCAGGCCTG CACTCTTTTG GTACCCGTGA CGCACTCCGG AACCGTGCAC
GGGTTTTTGG TGTGGTGGGA ACTCGATTTG TGGACCGCGC ACGACAACGA CGACGATACG
TTGACGTATT CTACAAGTCC CCACACCGGG ATGGCTTGGC AGGATCATTG GCATGTTGTT
TTGCACGTCT TACGGGATAC TCAAAAAGTG CAAAAGGGCG AGACTATGAC AGTACAGGCT
TCGCACGACG ATACGGCAAT TACACTGTTG CCTATAATTT CGGCACCGGC CCCACCACCG
TCCAAGCGTA TCCGCACGGA ACCAAACTCC GGCCATCACG CCCTCATCAC ACCTTCACGA
GCCTTGCAAC TAAACGATAC TGCCCGGGCC TCCTTTCTCG ACCAGGCCAT CACCCATGCA
CTAAGTGTAA AAGGACCGGA CCAACTGGTG TTGGATGTTT CGGACTTTAG TTGGTGCGCC
ATTGTGGCGG CTCGTCAGGG CGCCACGCAG GTAGTATCGT TGGAAGCTAG TAGTAGCAAT
ACCAGTCTAC CCCACACGAC CGCTCGTGTC GCTCAGCTCG GCAACCAATT GCCGCGTGCC
CCCCATGGCC GATTCGAAAT ACTACAGGCC CACGCTGAGC AACTGACGAT CTCGGCCTTG
GGTGATGTTC CCGCAGATAT AGTTGTGGCT GAACCCTACT ACGAGCTGTT AGAGAACTGG
CATCTGGAGG AAGCTATCAA TTACTACAAC TTAGTTCGAG CCTTGCGGCG CACCAAGCTC
ATCACACCCG ACGCGTGTGT CATTCCGTCC ATCTGTCGCG TCATGGGCTG CGCGATCCAG
AGTGATCAAC TGCGATCAGC CTACCGAGCC TGTGGCGACG AAAAAGGCAA AATTCACGGT
CTCGACCACC AATACGTTAA CGCCATCGGC GCCGATTTCC ACCAGTACAA CTTGAACCTT
CCCATGTGGC AATACGAGTA CCAAATGTTG TCCGCACCGA GCGTCCTTGC CACTCTGGAC
TACAGGAGTC CCGGTAACGG TCCAGTTCGT GGTGAAGCGC AGATGCCATT CACCGCCAAG
GGGCGTTGCG ACGCCTTGCT GATCTGGGTC GAATACTCGG CAGTGGCCGA CTGTACACTT
TGCTACACCA CCAACAACCA CTTCCACCAT CAAGCGGTGC GTATGCTGCC CACGTCATGG
ATCGTAGACC CGTCGGAAAT GTCCAAAACC GCCTTAATTT GTCAGAGTCA AATCGGTGGT
CTCGATCCGT TCAATTGTCA TTCATTTGAG GTACAGATTG CATGAGACAA CGAAACATGC
AACCTACATA TTCAACTTCG ACACTCATCG TTCGCTACCT CCACCGGGCA ACTTTCCTTC
AACTCGTTCA AGGATATTTC CACGTCGACG TATTCCAAAT TCAGGGCACG GTGCAGAATC
GATTTGTACA CCTGAATTTC TGGACACAAT TCACGGCAAA GAAGAGTCGT CGCCGTTTCC
GATAACATAC GATCGGCATC GGATTTTTTT CCAGCAGACG AATTGCGCGT GGGAAAGGCA
TCCGTGACCG TTTCGTTACC ACCAATTGCG CGTTCGGTTG AATTCCAATC GGATTCCAAA
TGCTCGGTCC GGATGATTAA CAGTTTGGCG TCTGACGGCA CTTGATTCAT AAAGTATCCA
AAGTTGTAGT AGTTGTGTCG GACCATGGGT CGTATTCCAC GAATGGCCGC GTGCGCCCGA
TCTTTACAAA CTTTCGATGC GATGCCGTCG TCCGCCAAGC CCTGTTCGGC CAAATCATTG
AGGGTGGGAA AGGGACAATC TAGAAAGAGC GCTTTGCGTT CTTCGTACAT GTAACTGTTC
GGATCCAGAT GGATACCCGG ACGTTCGTAG GTAAACCAGG ATTGCATCCT CGCCAGAGGA
TTGCGGACGA CCATGAGGTA GTACGCCATG TCGTCGTAAC AGTCGTTGAT GTAATTGTGC
AGGACGTTTG TAACGGAGCG CGGCAATCGT CCCCCCGGAT TCGCGATGCT CTCATTCCCT
GTTGGTTGCT GGCAGTCGTA CCGGAAACCG AGTAGACAGC TCAGGGTACT TCCTGCGGTC
TTGCCCACGT GGACGAAACA TACGCGTTCG TCGGGTGGAC CTCGCGCTTG GAAAGCGGCA
ATTTTCGTGG CCCAAACGGG GGGCGGCAAA CCCGATCGAA TCTTGTAGGC CGATTCCGTG
GCAGGATCAG CAGCGTCGCG GTACTTGACC GTAACCTTTT TTTCGACTAT CGGCCATACG
TCTTGCCAAT CTCTCGTGGG AGTTGGTCTT TCGATCGTGC GAGCTCTCGT TCCAAGAGTC
GCACCAGTCG TCAACGAGGA CGATACCAGA CCCAAGACTT GGACTTCCAG CTCCTCCAGA
CTCCACCAAA GCCTGCAGGA CGACAGCAGA CACATTAGTA TTCCCATGAT GCACAGGGTC
CCAGTGCGGT TTAGAGGGAC CATGGTGTAT T
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| Protein sequence | MATTTDTETV DDSTTHNNIL ERAFQTARYN EIVTVTLEDG VTEVSLVPCL DETNGNVQWN
PLPLPDTNSS SVDDDGSDNN ESFRIGVRRH LQTKRWIFPM LNDTVRNDLY QKAIDRAVTY
LSGSQSEDTM WHVWDVGTGT GLLGMMAATA IRKNDRPDTD VQRSRDGGVK VVRAFEMSAP
MAMVARQTVR DNHLADRVHV HNAHSAQIAP LHATRDATDR MPGGDDIDDV STRTPSVLLC
VSELLEDGLL GEGWLPAIRD VWNRHWSPQS HHHCHHMKKA IIIPQQARVY AQAVTADNDW
ISMYYPPTRQ HGNATSMSLT LDAQGTSLVD MPVVRIPLHA RTLLHTPVDP NDCTRRPPAL
RVLSDPFKAL DISVQRDIIP GPEGQACTLL VPVTHSGTVH GFLVWWELDL WTAHDNDDDT
LTYSTSPHTG MAWQDHWHVV LHVLRDTQKV QKGETMTVQA SHDDTAITLL PIISAPAPPP
SKRIRTEPNS GHHALITPSR ALQLNDTARA SFLDQAITHA LSVKGPDQLV LDVSDFSWCA
IVAARQGATQ VVSLEASSSN TSLPHTTARV AQLGNQLPRA PHGRFEILQA HAEQLTISAL
GDVPADIVVA EPYYELLENW HLEEAINYYN LVRALRRTKL ITPDACVIPS ICRVMGCAIQ
SDQLRSAYRA CGDEKGKIHG LDHQYVNAIG ADFHQYNLNL PMWQYEYQML SAPSESR
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