| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_49243 |
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| Symbol | |
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| ID | 7195704 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011689 |
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| Strand | - |
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| Start bp | 350162 |
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| End bp | 352081 |
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| Gene Length | 1920 bp |
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| Protein Length | 576 aa |
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| Translation table | |
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| GC content | 55% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002183975 |
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| Protein GI | 219127506 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.312572 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CTCTATCGAT CGTGAAGGGA CATACTCACA GTCAAGGAAT ACGTATTTCG AGCATTCAGT
ATCACAATAA TTACAACAGT ACAATCTAGA CGCGTGCGCC TTGCCGTTCT TACTAATACG
CACGACCACT GCCAGGGTTT TTCGTTCGCC GTCCCTCCTC CCGAACGATT TCCCTACCAC
ACTTCCAGGA TGCCCGCCGC CGGCTCCGAG CGCACCATGG CGACACCACT GCCGCTTCCG
GAAGCGGTAG TACCCGCCGT ATCGCTGTCG TCCCGTATTG CGCGTGGAGT CGGATCGATC
TGGACTACTC TGTCCGGTCA CAAACGACCC GCAGCAGACC GCGACGATAT TGCGGAAGGA
GGGCCGCAAC GGCAAGTCCG CGCACGCGTA TCCGCCTCAC CCAAAGCGGA GAACGGTACG
TTTGGATCCG TGCCCGACGA CTCTGTGACC AACCCGTTGT TGTCGTTGCC TTTGTGGGAT
CCTGTGGTGC CTCCAGGCTT CTGTGGAATT TGTCTCGATA CCGTCCTGAT GCCTACTAGT
AAGGTTGGTT CCCTTCCCAC TTGCGGTCAC TGCTTTCACG TACATTGCTA CGCCAAGTGG
AAGGCCTTTT GTCCTTCTGC CGTCGCCTTT TGGCGGTGTC CCTTGTGCGA TCAAGACGCG
TCCGACTTTT ACAAACTCCA ACTCTTTCCC CAGCTCGAGC AAGCCGACGA CGACAATAAC
AACAACCACG AACAGTCGCA GGACCAAGTC TCTCGACTCC CCACGCCACT GGAACGGGAC
GAATTCCACG ACGCCGTCTC CGGTGTAACT CTCAGTGGCA CACTCCGCAA GCTCGTCAAC
CACGTATCCT CCAGTACAGA CCCGCACGTC GTCACGCGCG CCTTGGACGA ACTTTCGACC
TTGGCCTTTC GGTACAACCA CGCCCGCGTT CCCATTTGCG TGACGGGAGG GATTGCCGGG
ATTGTGCGCG TCTTGACCAC CTGGTCGCAC GATACCAAGA CCACCACGAC TGCTGCACTC
CGACACGCTT GTCAGCTACT CGGGAATCTA CCCCTCAACG AGTCGGCCAC GGAACGGATC
GAAATCGCCA TATGCAATGC CGGAGGCATG GACGCCATAT TGTCCATCAT GCAACAACAC
CCCGACGACG TGGATTTACA AGAACAAGCG GTCTTTTCCC TAGGCAAATT CATCTGCGAA
GATGAACTGC TCGAGACCAA TTACGTGGCC GATCAAATAC CGGCCATTTT TCGAACCATG
CAACGACACA GTGATGCGGC GTTGGTGCAA ACCTACGGGT GCTACGCCTT GGCTAGTTTA
ACCTTTCGAG AAGACGTTCA GGAAGTGGTA CAAATGATCA CCGCGCAACA CGGCATACCT
ATTGTTTTAC AAGCACTGAC ACAGCACGTC GACGATCCCG ATGTGGTGGA TGCCGCCTTG
AACCTGTTGG CCAATCTCAC CGAACACGAT ACCTCGCAGA CGCGCGGTAT CCTCGAATCG
AAATCACTCA AGGTTCTGGG CCGAGCCATG CAGAATTTTA CGGAACTTGT TGATGTACAG
ATGCACGGCA TTGTTATTCT CCAACGAATA TTACGATTGC CGGACCGTAT CAGCGAAGCC
GCTCTGATGG AATTGGGGCA AGCCGGGGTT GTGGTTGCCT TGACCAAATC CATTGACTTG
TATGCGGATA AAGTCGATTT GCAAATCGGG GCGATTATCA TTCTCGCACG GTTGGCGCCC
CTGGTCGATC TGCAACCAAT CATGCGCGAT GCCGGTACAC CGGGGGTCCT GCGGGTCACG
ATGGATATAT ATAACGATGA AGAAACACTC ATGACGCACG CTTATCAGGT GTTGTCCTGT
TGTTCCGAAT CACCGGTGCC CGCGGTTGCC GCGGCGGCAG CGGTCGATGT GGAGGCGTGA
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| Protein sequence | MPAAGSERTM ATPLPLPEAV VPAVSLSSRI ARGVGSIWTT LSGHKRPAAD RDDIAEGGPQ
RQVRARVSAS PKAENGTFGS VPDDSVTNPL LSLPLWDPVV PPGFCGICLD TVLMPTSKVG
SLPTCGHCFH VHCYAKWKAF CPSAVAFWRC PLCDQDASDF YKLQLFPQLE QADDDNNNNH
EQSQDQVSRL PTPLERDEFH DAVSGVTLSG TLRKLVNHVS SSTDPHVVTR ALDELSTLAF
RYNHARVPIC VTGGIAGIVR VLTTWSHDTK TTTTAALRHA CQLLGNLPLN ESATERIEIA
ICNAGGMDAI LSIMQQHPDD VDLQEQAVFS LGKFICEDEL LETNYVADQI PAIFRTMQRH
SDAALVQTYG CYALASLTFR EDVQEVVQMI TAQHGIPIVL QALTQHVDDP DVVDAALNLL
ANLTEHDTSQ TRGILESKSL KVLGRAMQNF TELVDVQMHG IVILQRILRL PDRISEAALM
ELGQAGVVVA LTKSIDLYAD KVDLQIGAII ILARLAPLVD LQPIMRDAGT PGVLRVTMDI
YNDEETLMTH AYQVLSCCSE SPVPAVAAAA AVDVEA
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