Gene PHATRDRAFT_49224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_49224 
Symbol 
ID7195527 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011689 
Strand
Start bp275786 
End bp276756 
Gene Length971 bp 
Protein Length207 aa 
Translation table 
GC content44% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002183845 
Protein GI219127236 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CAGCTGCTTT CAATTTTGGT TTCTAACGTT CTGTTTGGTA GCCGAAAGGA AAAGGATTCT 
CTCCCAGTAT TAATTGTGAA GTAGGCTAAG CTAGGGGGTA GCTACTGTTC TCTTCTCTCA
GATTTCATTG CAATCAGCGC AAGTGTCTAC GACTCAACGA TGGATATGGG CATGGCTACT
GCGGCTGACT CTTTCTGCAC TTCGTCGATG GGAGGAGGAA TGATAATGTA TATGGACGGT
AAGAAACTCC GTCAAGCATG TCCCGTGTTG AACCGAATTG AGTAAGCTGA TAGTGAGAAT
CTTTTAAAAT TTATATCTTG CAGGTTTTCG CTTTTCTTTG AAAGGTGGAC AACCTTGCCT
CAACCTTTTC TTCCCGGAAT GGACATTAGA TTCGAAGGGA AAATTCGTTG CTGCCATGGT
TGGAGTCTTG CTCCTTGCTG TAGCCGTTGA GGGTGTGTCC AAACTTAGGT ACTGCATAAT
TCGAGCCGCG AAGGCATCGT ACCGCAGTCC TGATCAAAAT CAATGGAATC TTACCTTATT
ACGTTTTGGG ATTTCTTCTA TGCACGGTAA GTTCTCTATT ATAAAACAAC GGAAATGGCG
GGTTCGTCAG CATATTGTGT CTAAAATTTG GAATATATTG TGTTGGTAAG GCGCTCAAGC
TTTATTCGGC TACATTATTA TGCTGGCAAC TATGACGTTC TCTTTAGAGC TTCTCTCTTG
TGTAATACTT GGTTTGGGCA TTGGATACGG CGTCTTTTTT CAAACAGATG ATGTCTTTCG
GGAATCAGGT CACGTGACAA CGAATCCTTG TTGTGCCTTC ATGGAGGATG AAGTTAAGGA
TCTGCACAGC CTGAAACGAG ATGTAGTGGG CGCCTTCCAT CCGGATGACA CTCCCGTGTC
GACTACGGTC TCGGACTCAG GTACTGATAA CTGCACACCT AATCCCGTCT AATTGATCTG
AACAGTAAGG C
 
Protein sequence
MDMGMATAAD SFCTSSMGGG MIMYMDGFRF SLKGGQPCLN LFFPEWTLDS KGKFVAAMVG 
VLLLAVAVEG VSKLRYCIIR AAKASYRSPD QNQWNLTLLR FGISSMHGAQ ALFGYIIMLA
TMTFSLELLS CVILGLGIGY GVFFQTDDVF RESGHVTTNP CCAFMEDEVK DLHSLKRDVV
GAFHPDDTPV STTVSDSGTD NCTPNPV