Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_49220 |
Symbol | |
ID | 7195524 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011689 |
Strand | - |
Start bp | 259895 |
End bp | 261190 |
Gene Length | 1296 bp |
Protein Length | 217 aa |
Translation table | |
GC content | 51% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002183959 |
Protein GI | 219127473 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0442674 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CAAGGACGAG CGAAGCAGAA CTTCCATGGC GATTAGGATC AGTTCGGTGC GTCCCGCTAT CTTTGTCTTT GTCGGATTTA CACAACCGTT GTGGTGTTGT GTCTAAGGAT GGGTGGAGGG TCAAGTAAGC CGAAAGCAAA AGCTGCGCCG CCAGCAATTT CCGACGTTGA TCGTGCCATC TTGGACCTGA AGAATGCCCG TGATCGTCTA CAGCGCTACC GGACCAAGCT GGAAGCGGAC GACGCCAAGC TTTTGACACA GGCGAAAAAA GCCAAAGATA CTGGCAAAAG AGAGAGGGCT TTGGGATTGC TGAGATTACG CAAGTACAAG ACACAACAAG CTAAAACATG CGAAGACCAG CTTTTCAATG TGCTCCAGAT GGTAGACACG ATAGATTCGA AGCAGAACGA GACACAAATG TTGTCCGCAT TGGCTGCTGG AAAAGATACT CTGAAAAAGA TGCACGAGGA GACAACAGTA GATGATGTTT TGGACTTGAT GGAGGAAATA AAGGATGGAA TTGCTGTTGA GCAAGAAATT ACGGAGATTC TACAGGGAGT TCCGGAATTG TCAGCCGCGG ACGAAGATGC CGTGGAGGCC GAACTGGAAG CCCTGCAACG TGAAATGGAA GGCGGTACAC AAAGCGATAC TACGAAAATT CCGGAAATGC CAGTTGTCCC GACATCGAAA CTGCCCGATG TTCAAGAACC GGTGCACGAA GCTGCCAAGG CCAAGCTTGC AAGGGTTGCA GTTCCGGGAT AGAAGCTTAC TCTGGGTGCG CAAGTGTCTA AATCAATTCA CTATTGTTTA GAATCACAGC TGAAGGTACC AGTAACTTTA CTACTGGCGT GATCCGTCTT TTGTTTGTGT CGTCCTTTTT TGCTAGGCTG TTCCTCACCA CCCTGTACTT CTTCTCTTCG CTGCCGCTTC CTCTCGTCAC GAGCAATCAA AATTTTGGCA CGGGCAATTT CTTCCTGGAT CATTCCATCT CCCCTCGTTT TCATGTATCG TTTACGCAGT GCCGTGTTGG CTTTCCGAGT GTCCACGTCC TTCTTGTCGC TGTAGCACGT TGTCGTACTC TCGGTCGAAT GCGGAACTTC TTCCGGGTTG ACTTTCTTCT TGGCCAGCGC CTTCTTTTCT TTCTTGCGTT CGTCCCGTGC TATCAGAACC ATGGCGCGCT CTCGATCTGT CTCGGTCATA CCTTCTCCTT GAGTCTCAAC GTAGCGCTGG CGCAACGCCT GATTCGTTTC GATGACGGCG GCGTCGGCCT GCGGCAGCCA ATGGGTGGGT TTGCTG
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Protein sequence | MGGGSSKPKA KAAPPAISDV DRAILDLKNA RDRLQRYRTK LEADDAKLLT QAKKAKDTGK RERALGLLRL RKYKTQQAKT CEDQLFNVLQ MVDTIDSKQN ETQMLSALAA GKDTLKKMHE ETTVDDVLDL MEEIKDGIAV EQEITEILQG VPELSAADED AVEAELEALQ REMEGGTQSD TTKIPEMPVV PTSKLPDVQE PVHEAAKAKL ARVAVPG
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