Gene PHATRDRAFT_49220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_49220 
Symbol 
ID7195524 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011689 
Strand
Start bp259895 
End bp261190 
Gene Length1296 bp 
Protein Length217 aa 
Translation table 
GC content51% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002183959 
Protein GI219127473 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0442674 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CAAGGACGAG CGAAGCAGAA CTTCCATGGC GATTAGGATC AGTTCGGTGC GTCCCGCTAT 
CTTTGTCTTT GTCGGATTTA CACAACCGTT GTGGTGTTGT GTCTAAGGAT GGGTGGAGGG
TCAAGTAAGC CGAAAGCAAA AGCTGCGCCG CCAGCAATTT CCGACGTTGA TCGTGCCATC
TTGGACCTGA AGAATGCCCG TGATCGTCTA CAGCGCTACC GGACCAAGCT GGAAGCGGAC
GACGCCAAGC TTTTGACACA GGCGAAAAAA GCCAAAGATA CTGGCAAAAG AGAGAGGGCT
TTGGGATTGC TGAGATTACG CAAGTACAAG ACACAACAAG CTAAAACATG CGAAGACCAG
CTTTTCAATG TGCTCCAGAT GGTAGACACG ATAGATTCGA AGCAGAACGA GACACAAATG
TTGTCCGCAT TGGCTGCTGG AAAAGATACT CTGAAAAAGA TGCACGAGGA GACAACAGTA
GATGATGTTT TGGACTTGAT GGAGGAAATA AAGGATGGAA TTGCTGTTGA GCAAGAAATT
ACGGAGATTC TACAGGGAGT TCCGGAATTG TCAGCCGCGG ACGAAGATGC CGTGGAGGCC
GAACTGGAAG CCCTGCAACG TGAAATGGAA GGCGGTACAC AAAGCGATAC TACGAAAATT
CCGGAAATGC CAGTTGTCCC GACATCGAAA CTGCCCGATG TTCAAGAACC GGTGCACGAA
GCTGCCAAGG CCAAGCTTGC AAGGGTTGCA GTTCCGGGAT AGAAGCTTAC TCTGGGTGCG
CAAGTGTCTA AATCAATTCA CTATTGTTTA GAATCACAGC TGAAGGTACC AGTAACTTTA
CTACTGGCGT GATCCGTCTT TTGTTTGTGT CGTCCTTTTT TGCTAGGCTG TTCCTCACCA
CCCTGTACTT CTTCTCTTCG CTGCCGCTTC CTCTCGTCAC GAGCAATCAA AATTTTGGCA
CGGGCAATTT CTTCCTGGAT CATTCCATCT CCCCTCGTTT TCATGTATCG TTTACGCAGT
GCCGTGTTGG CTTTCCGAGT GTCCACGTCC TTCTTGTCGC TGTAGCACGT TGTCGTACTC
TCGGTCGAAT GCGGAACTTC TTCCGGGTTG ACTTTCTTCT TGGCCAGCGC CTTCTTTTCT
TTCTTGCGTT CGTCCCGTGC TATCAGAACC ATGGCGCGCT CTCGATCTGT CTCGGTCATA
CCTTCTCCTT GAGTCTCAAC GTAGCGCTGG CGCAACGCCT GATTCGTTTC GATGACGGCG
GCGTCGGCCT GCGGCAGCCA ATGGGTGGGT TTGCTG
 
Protein sequence
MGGGSSKPKA KAAPPAISDV DRAILDLKNA RDRLQRYRTK LEADDAKLLT QAKKAKDTGK 
RERALGLLRL RKYKTQQAKT CEDQLFNVLQ MVDTIDSKQN ETQMLSALAA GKDTLKKMHE
ETTVDDVLDL MEEIKDGIAV EQEITEILQG VPELSAADED AVEAELEALQ REMEGGTQSD
TTKIPEMPVV PTSKLPDVQE PVHEAAKAKL ARVAVPG