Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_49218 |
Symbol | |
ID | 7195523 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011689 |
Strand | + |
Start bp | 257286 |
End bp | 257899 |
Gene Length | 614 bp |
Protein Length | 165 aa |
Translation table | |
GC content | 52% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002183840 |
Protein GI | 219127225 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0000563666 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CAAGCCTTCT CCCACAGTCC TTGTCGGCTC CCATCATCCA GACCATTTCT ATACTCTACA CTATTTGAAT ATAATGAATA TCCTACGTTT GGTTGGGTTT TTGGCTTTGG GATACGTGGC ATCCTTGGCG ACCGCGGTCG ATCCGACCGA CGAAGTGGAG GCGACCCCCG AAGACGAGGT AGGTTGGGAC ACTCCCACCC CACGACGACG CTCATTCGCA GTTTTTAACA TCGACGACTT CCGCACCGTT TACGCCCCTC CTTCTCACAC ACCGTATCCC CGTTCTACTC GTACAGCGCC AACTCCAACG CATCTTTGAT ATTCTTACAC CGGAGGACGT TTGTCGAAAC GGCGAATTCA ATTTTGGCCC GTGTGACGTG TCGCGGTTTC CCGTCTGCAA CAGTGAACAG CTCATTTGTT ACAACCGACG ACCCCGTCGG GACTTGTTTT GGCCCGACAA CCGTCAGCCG CATTTTTACA TTGATTACAC CAACGTGTAC TGCTATCCGG CCAACTGGGG AGGTTGCTCT TCGTGCTCAC CTGGACGATA CTGCCGTAGT GAAGAACGTT GTATTCTCGA CGACTCCAAT TATCCCTGTG CGAACTGGAT TTAA
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Protein sequence | MNILRLVGFL ALGYVASLAT AVDPTDEVEA TPEDEFLTST TSAPFTPLLL THRIPVLLVQ RQLQRIFDIL TPEDVCRNGE FNFGPCDVSR FPVCNSEQLI CYNRRPRRDL FWPDNRQPHF YIDYTNVYCY PANWGGCSSC SPGRYCRSEE RCILDDSNYP CANWI
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