Gene PHATRDRAFT_49215 details

Gene Information

• Locus tag: PHATRDRAFT_49215
• ID: 7195685
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011689
• Strand: -
• Start bp: 247627
• End bp: 249742
• Gene Length: 2116 bp
• Protein Length: 582 aa
• GC content: 51%
• Product: predicted protein
• Protein accession: XP_002183955
• Protein GI: 219127465

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.108223
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CAACGCAACA AAAACTAGTC TACTTGTCGC TACCTCGAGC AGCAGAGCTC ACAACATATC 
TAACTAACTG CGAGGCGGAC CTCTGAGAGC AAACGTCAGA ATTTCTGTAT GTGCACAAAG 
CACAACAATA CTGCGTACCG AATCAGTCCG CCACGTCGTC AACGATCGAC AGTGCTTCAC 
ATCAGTCGCG CAACCTCGTC CAAGGTGTGA GGGACTTCAC CAATAGTTGT CACAAAACTT 
CTGGGCTCAA AAAAAGATTG GAAAATCGTA AGACAGGACA ATGAAGACTT ATGGTTTTGC 
ATCCGTACTC ATACATCTTT CGTGGGGGCT TATATTCACC TTAGCCACCG AAGCCGACTT 
TGATGCCCTA ATAGCGTCGA TGACAGCCGA CGCAATCGAG CTTGCCCGAC AAGTTGAACT 
CCTCTATCAA AAGCGCTGCA ACGAGATTTC TTTGCGACAA TGTGCTCGTG GCAGTTACAA 
CGAGTGCACA TCACTTTACC CCAACCAGAC ATGCCCCGGT GGCGAAGATT TGAACGTTGC 
CCAATGCGGC GACGGAGTCT CCTGCAGCGG TCTCTGGGAC TATTCCATTT CGAATACGCG 
TTTGCATCAG AACTTGGTAG ATTCTGCTGA TGGCAACCCG TCCGATCCTA ATGTCATCGA 
GACCATATGC TTCACGCAGC AGCTAGACGA GTTCTTTGTT CAGAAGCGAG CTGAGCAAAA 
GCCATATTGG GACAGCCTAG GGCTGCGTAC TCCACAAATG TACTTCGGGT CACAGAATGG 
CGCCTTTCGG ATATACCCGG CTAGACAGTC GGAAACTTGC GGAGTATACG ATCCCCGTCT 
CCGGCCCTGG TATATTGCTG CCAGTAGCGG ACCCAAGAAC GTCGTACTTG TTCTCGATAC 
CAGCGGCAGT ATGACCGACG GAAACCGTCT CAGTCTTCTC AAGCAAGCTG CAAAGCAAGT 
CATCGAAACA TTGACAGTTG GAGACCGCGT TGCCATTGTT GAGTTTTCGT CGCAGGCGAA 
GCTGTTTGCC CAAGACAACA AGTTTCTCTT CACGGCAACG CAGAAGAACA AGGAACTTCT 
AGCAACCCAC ATCGACAGCT TCACGGCAGC AGGGGCAACG AACTTCCTGG ATGCGTTCAC 
AGCGGCCTTT GCAGTCCTGA ACGACTCCAT CGATCAGGAA TATCACGTGG GATGTACCAC 
AGCCATCCTC TTTTTAACCG ACGGTGAAAT GACGCAGCCA GAAAATGTAC AGGAAGCCGA 
TGTACTGGAC CTGGTCAACA CTGGCATTTC CAATTTGGAG GCGCGACTAG GTCGATCAGT 
CTTCTTGTTC ACCTTCAGTA TCTCCGACAA CAACAATGTC CATGCCTTCC CAAAGCAGAT 
TGCCTGCTCC ACAGGCGACA ATGGTATTTG GTCCAAGATC GTCGACGAGC GCGAAATATT 
TGACTCGTTG ACCAGCTACT ATCGTTTGTT GGCCATTGGA CTGGGCAGAG ACGGGAACGA 
GAACTTCGCG GCGTGGGTAG AGCCGTATCA ATTTGCTTCG GGCGAAATCT GGGGCACTAC 
AGTGTCAGTG CCCGTTTATG ATCGATCGGT GACTCCGAAC TTGTTTCTCG GTGTGGTTGG 
TGTCGACTTC ACCTTGACAG CTGCGGACAG AGCACTCGGG GTCCCCGATG GAAGCAAGGA 
GAGCATTAAT CGAATCGTAA GGCAGTCGAC TGCTGTTTGC CCGACAATTG ATCTCGCATT 
GTGCGAGCTC GAGAGCTTCC GCCGCCGCAG CAGTGCTGGT GACGAGGCGC TGTGCACGAC 
GAATTGCACC GCCAGTGAGT ATTTTGAGAT CGAGGAGCAG GCCTGTTCCT TTGTGAATGA 
TTATCCACGT GACCTCTTTA TCAACAACAT GCTCCAGGGC CTCTCTTACG AGGAACGCGT 
GTGCTGCGTT GTTGGAGAAA ATACTGTTCA TACAGCAGAT CAATGCGTGG CTGGCCCCGA 
CGAACTGAAT ATAGGCTTAA TTGTTGGAAC TGTGATTGGA GGAATTTTGG TCGTCCTGTT 
AGTGATAGCA GCTTGGATCT ACTTCAAGCA TTTTTATGGC AAAAAGGGAT CCTTTCGCGA 
CAGCCACGAG TCGGCT 

 

Protein sequence

MKTYGFASVL IHLSWGLIFT LATEADFDAL IASMTADAIE LARQVELLYQ KRCNEISLRQ 
CARGSYNECT SLYPNQTCPG GEDLNVAQCG DGVSCSGLWD YSISNTRLHQ NLVDSADGNP 
SDPNVIETIC FTQQLDEFFV QKRAEQKPYW DSLGLRTPQM YFGSQNGAFR IYPARQSETC 
GVYDPRLRPW YIAASSGPKN VVLVLDTSGS MTDGNRLSLL KQAAKQVIET LTVGDRVAIV 
EFSSQAKLFA QDNKFLFTAT QKNKELLATH IDSFTAAGAT NFLDAFTAAF AVLNDSIDQE 
YHVGCTTAIL FLTDGEMTQP ENVQEADVLD LVNTGISNLE ARLGRSVFLF TFSISDNNNV 
HAFPKQIACS TGDNGIWSKI VDEREIFDSL TSYYRLLAIG LGRDGNENFA AWVEPYQFAS 
GEIWGTTVSV PVYDRSVTPN LFLGVVGVDF TLTAADRALG VPDGSKESIN RIVRQSTAVC 
PTIDLALCEL ESFRRRSSAG DEALCTTNCT ASEYFEIEEQ ACSFVNDYPR DLFINNMLQG 
LSYEERVCCV VGENTVHTAD QWDLLQAFLW QKGILSRQPR VG