Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_49202 |
Symbol | |
ID | 7195677 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011689 |
Strand | - |
Start bp | 208293 |
End bp | 209623 |
Gene Length | 1331 bp |
Protein Length | 227 aa |
Translation table | |
GC content | 56% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002183948 |
Protein GI | 219127450 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.195232 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTCACTCTCT CTCTCATAAA AACCAAAACG CCGCAAATTG CACCAGCTTT TTTGGTTGTC CTCCGCCTCT TTCCGCACCA CCATGATCTT CAAGAATCTT CTCTCGCTGG CCTCGGCCGC TTTCTTGGCC GCCACCGCCA CCGCAAGCTC CCACGACGCC CTTCCCGTCC AGACCTTTGA CTCTTCGGAA CAGCTCAGCC GTGATCTGCA AATTGACGAG GCCTCCTTTG CCATTACGTT TACCGCGGTC AGCACCGCCG CTAGCACGCT CACGATGACG TACGCCAACG GTGGAGGTGA CGCACAAAAT CCCATCGGCG GTCGTTTCGA TATCTTCACT GCCGGGTCAT CGGGGCGCAT TCCCCGTAGT GGAGCCGGTA GTGAAGTGTT GGCCGATCCG AAACTTTCCT GTTTCAGCAG AGGAGGGTCC AATTTCAACT ATGCTGCTTT GACATCCGGT ATTACCGCCG ACACGAGCAA TATCTTGTCC CCTACATCCA CCTTTGCTAT CTCCTTTGAC GAAAACGTCA CCGCTACCCA GCCTTATTAC TCTGATACTG GGGCTCCTAC CGATTTGATA GTCAAGTACT TTTTTTGCGT CAAGTTTACC CTGACCAAGG AAGTTGGAAG CCCTGCAGTC GCAACGGACA TTAACTACCG CGAAACTGCG TATGAAGTGA CTCTCACACT CAACGGTACC ATTGCTAACG CGACCGCTTT CACCGTGGAC ACCTTGGACC CAGGTACTGA CACCGACGAG GTAATTGAGT ATACCGTGAG TGCGGGACTC TGTCCTAGTT TCACTACGAC GGTGACGCAG GGACTTACCG TTCCGATTTG CATCGTTTCG GACCAATTTC CTTTGGCCAG TATTGATTCG ATCGACGAGC TTACCTTCAC GGCCACCGTT CCCGACCCCG ACGTTGTTCA GGCGATCATT ACGGGCGGCA GCGCCGCTGA TGGAGCCACC GGTTTGTACG GCATTGCCAC CGCAGATGCC GAGTGCCCGG CCAACGAGTG CATTCATGTG GACGTGATTG TGTACGCCAT TTTCGCGAAT GAAGCCACGA CCAACTTGAT TGTGGAAATC AGCGGCGACG CGGTCATGTC TGTGGGACGT ACTGCCCGCA AGTTGCGTGC GAAAGTCCAG CCCACACGCG AGTTGCAGGA GACGCTCCAG ATGCAAGCCT TTCGTAACGA GATTGTCCTC CCCCCTTTGC CTGGTTCGGG GGCCACGTTG GCCAACGTGT GCGCGGCGGC GGTGCCCTTC GCCGTGGCCG TGGTGGCCGG TGCGCTCGCT CTTTAAAAAG TGAGAGTTTG TGTGTGTGAA A
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Protein sequence | MIFKNLLSLA SAAFLAATAT ASSHDALPVQ TFDSSEQLSR DLQIDEASFA ITFTAVSTAA STLTMTYANG GGDAQNPIGG RFDIFTAGSS GRIPRSGAGS EVLADPKLSC FSRGGSNFNY AALTSGITAD TSNILSPTST FAISFDENVT ATQPYYSDTG APTDLIVKYF FCVKFTLTKE VGSPAVATDI NYRETAYEVT LTLNGTIANA TAFTVDTLDP GTDTDEY
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