Gene PHATRDRAFT_49202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_49202 
Symbol 
ID7195677 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011689 
Strand
Start bp208293 
End bp209623 
Gene Length1331 bp 
Protein Length227 aa 
Translation table 
GC content56% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002183948 
Protein GI219127450 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.195232 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTCACTCTCT CTCTCATAAA AACCAAAACG CCGCAAATTG CACCAGCTTT TTTGGTTGTC 
CTCCGCCTCT TTCCGCACCA CCATGATCTT CAAGAATCTT CTCTCGCTGG CCTCGGCCGC
TTTCTTGGCC GCCACCGCCA CCGCAAGCTC CCACGACGCC CTTCCCGTCC AGACCTTTGA
CTCTTCGGAA CAGCTCAGCC GTGATCTGCA AATTGACGAG GCCTCCTTTG CCATTACGTT
TACCGCGGTC AGCACCGCCG CTAGCACGCT CACGATGACG TACGCCAACG GTGGAGGTGA
CGCACAAAAT CCCATCGGCG GTCGTTTCGA TATCTTCACT GCCGGGTCAT CGGGGCGCAT
TCCCCGTAGT GGAGCCGGTA GTGAAGTGTT GGCCGATCCG AAACTTTCCT GTTTCAGCAG
AGGAGGGTCC AATTTCAACT ATGCTGCTTT GACATCCGGT ATTACCGCCG ACACGAGCAA
TATCTTGTCC CCTACATCCA CCTTTGCTAT CTCCTTTGAC GAAAACGTCA CCGCTACCCA
GCCTTATTAC TCTGATACTG GGGCTCCTAC CGATTTGATA GTCAAGTACT TTTTTTGCGT
CAAGTTTACC CTGACCAAGG AAGTTGGAAG CCCTGCAGTC GCAACGGACA TTAACTACCG
CGAAACTGCG TATGAAGTGA CTCTCACACT CAACGGTACC ATTGCTAACG CGACCGCTTT
CACCGTGGAC ACCTTGGACC CAGGTACTGA CACCGACGAG GTAATTGAGT ATACCGTGAG
TGCGGGACTC TGTCCTAGTT TCACTACGAC GGTGACGCAG GGACTTACCG TTCCGATTTG
CATCGTTTCG GACCAATTTC CTTTGGCCAG TATTGATTCG ATCGACGAGC TTACCTTCAC
GGCCACCGTT CCCGACCCCG ACGTTGTTCA GGCGATCATT ACGGGCGGCA GCGCCGCTGA
TGGAGCCACC GGTTTGTACG GCATTGCCAC CGCAGATGCC GAGTGCCCGG CCAACGAGTG
CATTCATGTG GACGTGATTG TGTACGCCAT TTTCGCGAAT GAAGCCACGA CCAACTTGAT
TGTGGAAATC AGCGGCGACG CGGTCATGTC TGTGGGACGT ACTGCCCGCA AGTTGCGTGC
GAAAGTCCAG CCCACACGCG AGTTGCAGGA GACGCTCCAG ATGCAAGCCT TTCGTAACGA
GATTGTCCTC CCCCCTTTGC CTGGTTCGGG GGCCACGTTG GCCAACGTGT GCGCGGCGGC
GGTGCCCTTC GCCGTGGCCG TGGTGGCCGG TGCGCTCGCT CTTTAAAAAG TGAGAGTTTG
TGTGTGTGAA A
 
Protein sequence
MIFKNLLSLA SAAFLAATAT ASSHDALPVQ TFDSSEQLSR DLQIDEASFA ITFTAVSTAA 
STLTMTYANG GGDAQNPIGG RFDIFTAGSS GRIPRSGAGS EVLADPKLSC FSRGGSNFNY
AALTSGITAD TSNILSPTST FAISFDENVT ATQPYYSDTG APTDLIVKYF FCVKFTLTKE
VGSPAVATDI NYRETAYEVT LTLNGTIANA TAFTVDTLDP GTDTDEY