Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_49189 |
Symbol | |
ID | 7195673 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011689 |
Strand | - |
Start bp | 169575 |
End bp | 170317 |
Gene Length | 743 bp |
Protein Length | 186 aa |
Translation table | |
GC content | 46% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002183940 |
Protein GI | 219127433 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.000230336 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CAATTTCTCG TACGATGGCT TCTTTCCTAT TTAAAAGTGC TGGAGTTGCT CTCGGTGCAA CTTACGTTGA GAAATTGTAC GGCCCAAAGG ATCCGGAAAA TTTGTTTGGT GCAACGACTG TTTTGCTTAT CGGAACCGGT CTTTGGTCTG TACTGCACGG AATGAAGGTC GGCAAAGCTC GCTCCAAATA CATGGAACTC GCCACGAAAG ACGGCGAAGA GGACGTGGAA CATCGCTATG CATTGCCGAA CCTGTACGTG CAAGGGATCT CAAAACATGC CCGGGCGTTT AACGCTATTC AGCGATCGCA CCAGCACATA TTCGAAACCT TTCCCCAGCT CGCGCTCTCA GCAATGGTGG GCGCCCTCAA TTTTCCCATT ACGGCCGCCT TATCTACATT GGTGTATGTA GCTGGACGTG TAGCCTTTTC CAACGGCTAC GCCAACTCGG AAGGCGATGT CAGCAAGCGT TATTCTTCCA AGCTCGCGCC CTATATGTGG TATGGTCTCC TCGTTAATTT TGCGGTTGGT ATCGTGTCAA GCATCAAAAT TATTGCGTCA AAGAAGATTT CTTGATAGCT TTTCTATGAA TCAGGAAATT GTGAATCTTC CGTAGGGGAT ACGATCAACG AAGACTTCAG GACTTTCGAT GTACAAGCGG AAACATTATA TTAGCTGGCT CTGGTAGCTA CCGTGCAAAC ATGTTGTTTC AACATTTAAT TTATGACTCT TTATTTATCT ATG
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Protein sequence | MASFLFKSAG VALGATYVEK LYGPKDPENL FGATTVLLIG TGLWSVLHGM KVGKARSKYM ELATKDGEED VEHRYALPNL YVQGISKHAR AFNAIQRSHQ HIFETFPQLA LSAMVGALNF PITAALSTLV YVAGRVAFSN GYANSEGDVS KRYSSKLAPY MWYGLLVNFA VGIVSSIKII ASKKIS
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