Gene PHATRDRAFT_49189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_49189 
Symbol 
ID7195673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011689 
Strand- 
Start bp169575 
End bp170317 
Gene Length743 bp 
Protein Length186 aa 
Translation table 
GC content46% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002183940 
Protein GI219127433 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.000230336 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CAATTTCTCG TACGATGGCT TCTTTCCTAT TTAAAAGTGC TGGAGTTGCT CTCGGTGCAA 
CTTACGTTGA GAAATTGTAC GGCCCAAAGG ATCCGGAAAA TTTGTTTGGT GCAACGACTG 
TTTTGCTTAT CGGAACCGGT CTTTGGTCTG TACTGCACGG AATGAAGGTC GGCAAAGCTC 
GCTCCAAATA CATGGAACTC GCCACGAAAG ACGGCGAAGA GGACGTGGAA CATCGCTATG 
CATTGCCGAA CCTGTACGTG CAAGGGATCT CAAAACATGC CCGGGCGTTT AACGCTATTC 
AGCGATCGCA CCAGCACATA TTCGAAACCT TTCCCCAGCT CGCGCTCTCA GCAATGGTGG 
GCGCCCTCAA TTTTCCCATT ACGGCCGCCT TATCTACATT GGTGTATGTA GCTGGACGTG 
TAGCCTTTTC CAACGGCTAC GCCAACTCGG AAGGCGATGT CAGCAAGCGT TATTCTTCCA 
AGCTCGCGCC CTATATGTGG TATGGTCTCC TCGTTAATTT TGCGGTTGGT ATCGTGTCAA 
GCATCAAAAT TATTGCGTCA AAGAAGATTT CTTGATAGCT TTTCTATGAA TCAGGAAATT 
GTGAATCTTC CGTAGGGGAT ACGATCAACG AAGACTTCAG GACTTTCGAT GTACAAGCGG 
AAACATTATA TTAGCTGGCT CTGGTAGCTA CCGTGCAAAC ATGTTGTTTC AACATTTAAT 
TTATGACTCT TTATTTATCT ATG
 
Protein sequence
MASFLFKSAG VALGATYVEK LYGPKDPENL FGATTVLLIG TGLWSVLHGM KVGKARSKYM 
ELATKDGEED VEHRYALPNL YVQGISKHAR AFNAIQRSHQ HIFETFPQLA LSAMVGALNF 
PITAALSTLV YVAGRVAFSN GYANSEGDVS KRYSSKLAPY MWYGLLVNFA VGIVSSIKII 
ASKKIS