Gene PHATRDRAFT_49160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_49160 
Symbol 
ID7195656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011689 
Strand
Start bp98434 
End bp99225 
Gene Length792 bp 
Protein Length261 aa 
Translation table 
GC content59% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002183927 
Protein GI219127406 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGAAAA ACCGTCGTGG CAAGCGCAAA CACGATGATC CTACGGTGGA CGAAGGCAGC 
GACACGGGAG CTCCAGACAC CACCACGGAC ACGGCAGTTC CGGACGAACC CGCCGACGCA
TCTCCCGAAG TGACGGAACC CACGGAACCA CCGGTGGATA TATCCAAACT CGTCACGAAG
GGTTTGTGGG ACGACGACGC CAAAGTCGTG GAATCTTCGC TGACGGAAGT AGCGAATCTG
AGTTTTGGAC ATTCACAGGC GGGGCCTAAC CGTGTCACCA TTAGTCTCAC CGGTGGACTC
CTCGCCATTG TCAAGGCGAT GCACCGCTTC TCCGACGACG CACTCGTACA AGCTGCCGGC
GGGAGAGCAC TCCAGAATCT GGCACTGGAT CAGAACAACA AGGGCGGTAT CGCTAGCGCC
GGAGGTATTC AAGTCCTCGT GGCCGCCATG GAACGATTCC CTGACGACTC CGCCGTGCAA
ATGGGCGGCT GTGGGACATT TCAGAATCTC GTATGGGGCA ACGACGAAAA CGGAACCCGC
ATCGTACAAG CCAAAGGCGT GCCCGCCATT ATTAACGCCA TGCAACGACA CGCAGATCTC
GCGGAAATGC AGGAATGGGC CTGTGGAGCG CTCTACCTCC TAGCCCTCGG GGAAGACAGT
GACGTCAAGG ACGCCATACT GGACGCGCAC GGATTGACCA ACATTGCCGC CGCCATCGAA
AATCATCGCG ACGATGCCGG GATTCGGGAA AAGGCGCGGA ACGCCCTGGC GAGGCTCTTG
TGGTGAGAAA TG
 
Protein sequence
MVKNRRGKRK HDDPTVDEGS DTGAPDTTTD TAVPDEPADA SPEVTEPTEP PVDISKLVTK 
GLWDDDAKVV ESSLTEVANL SFGHSQAGPN RVTISLTGGL LAIVKAMHRF SDDALVQAAG
GRALQNLALD QNNKGGIASA GGIQVLVAAM ERFPDDSAVQ MGGCGTFQNL VWGNDENGTR
IVQAKGVPAI INAMQRHADL AEMQEWACGA LYLLALGEDS DVKDAILDAH GLTNIAAAIE
NHRDDAGIRE KARNALARLL W