Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_49160 |
Symbol | |
ID | 7195656 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011689 |
Strand | - |
Start bp | 98434 |
End bp | 99225 |
Gene Length | 792 bp |
Protein Length | 261 aa |
Translation table | |
GC content | 59% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002183927 |
Protein GI | 219127406 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGAAAA ACCGTCGTGG CAAGCGCAAA CACGATGATC CTACGGTGGA CGAAGGCAGC GACACGGGAG CTCCAGACAC CACCACGGAC ACGGCAGTTC CGGACGAACC CGCCGACGCA TCTCCCGAAG TGACGGAACC CACGGAACCA CCGGTGGATA TATCCAAACT CGTCACGAAG GGTTTGTGGG ACGACGACGC CAAAGTCGTG GAATCTTCGC TGACGGAAGT AGCGAATCTG AGTTTTGGAC ATTCACAGGC GGGGCCTAAC CGTGTCACCA TTAGTCTCAC CGGTGGACTC CTCGCCATTG TCAAGGCGAT GCACCGCTTC TCCGACGACG CACTCGTACA AGCTGCCGGC GGGAGAGCAC TCCAGAATCT GGCACTGGAT CAGAACAACA AGGGCGGTAT CGCTAGCGCC GGAGGTATTC AAGTCCTCGT GGCCGCCATG GAACGATTCC CTGACGACTC CGCCGTGCAA ATGGGCGGCT GTGGGACATT TCAGAATCTC GTATGGGGCA ACGACGAAAA CGGAACCCGC ATCGTACAAG CCAAAGGCGT GCCCGCCATT ATTAACGCCA TGCAACGACA CGCAGATCTC GCGGAAATGC AGGAATGGGC CTGTGGAGCG CTCTACCTCC TAGCCCTCGG GGAAGACAGT GACGTCAAGG ACGCCATACT GGACGCGCAC GGATTGACCA ACATTGCCGC CGCCATCGAA AATCATCGCG ACGATGCCGG GATTCGGGAA AAGGCGCGGA ACGCCCTGGC GAGGCTCTTG TGGTGAGAAA TG
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Protein sequence | MVKNRRGKRK HDDPTVDEGS DTGAPDTTTD TAVPDEPADA SPEVTEPTEP PVDISKLVTK GLWDDDAKVV ESSLTEVANL SFGHSQAGPN RVTISLTGGL LAIVKAMHRF SDDALVQAAG GRALQNLALD QNNKGGIASA GGIQVLVAAM ERFPDDSAVQ MGGCGTFQNL VWGNDENGTR IVQAKGVPAI INAMQRHADL AEMQEWACGA LYLLALGEDS DVKDAILDAH GLTNIAAAIE NHRDDAGIRE KARNALARLL W
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