| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_49158 |
|---|
| Symbol | |
|---|
| ID | 7195655 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011689 |
|---|
| Strand | - |
|---|
| Start bp | 95076 |
|---|
| End bp | 96559 |
|---|
| Gene Length | 1484 bp |
|---|
| Protein Length | 462 aa |
|---|
| Translation table | |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002183926 |
|---|
| Protein GI | 219127404 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.472791 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TCTAGCTACT ACTGATTTAG TTACGACTAC TACTACGCTT GTCAGTTCCC TCCATTGCTT
CATCGACTCA TTCAAATCAA AGGAGTAAAC CATAGAATGA GCAGAAATCG TTCGCGAATC
CCGCGGAGAC GGTACACGTG GCCAAAGGCA GCGGTAGTGA TGACGGTAAT GGGTTGGGGA
CTCTTGCTCC TCGTATGCAC CGAAGCGGCC CAGTCGTCGT CGTCTCCTTC GGGCACCAAC
ACTACCCGTA GTCGGAGTAC GGCTACCGGT ACTACCGACG AATCGTCCAC GAGCGTTACG
CGGGTGGGGA ATCTGGATTA TCTCGACGCC GCCACCATGG CGTACTACTT GGATGCCCCG
CGGTGGACCG CCGATCATCC GGAACACGAC GTCGTCGTTC TCTTTTACGC ACAGTGGTGT
CGCAACTGTC ACGCCTTTGC CCCTCTGTAC GATCAAATGT CGAAATTACT ACACGCCGGT
ACCAAAGATT CGCAACTAGT AATGGGATTG TTCGATTGTG AACAGGACAA GGCGCATTCT
CGAGTTTGCA GTGACGCTGG CGTTACACAC TATCCCACCA TCATGTTCCT CTCCTCCAGC
GGACAAGTCC TCCAACGCGG ACGACGGTCT CCGAAAGTCC CACTGCCCAA ACACATCACC
ACCTTTCGTG GTAATTGGCA GTACGGCGAC GCCGTCATGG ATTGGATCAA GACACTGCGA
GGGTTGAGTC ACTGGCATCG CGCTGGATGG GGGAAAACGC TCCGGAATCT TCTCTTTGGA
CGACGCCACC GTGATCCCGC CCGCGAACGA CTCCCCACCG GAATTCCGTC GGGTACAAAC
CGGCGGGACG GAACCACGAC GGCCGGGAAC GGGGCCACCC ACGCCTCGCA CGAACAACAA
GAATTGCGAG ACGAAATCCG ATCCTTGTCC GATCTCGTCA TTCGCTCCAG TACCATTGTG
GACGCCCTAT TGTTCCCCGT CACCGCTGCC GCAAACAAGA CTCTATCCAC CAATGTGATA
CGCGACGAAA ACGCCAAGAA CTACACCGAC GTCTTTGCCT TTTTGCGAGA CGCCTGGCAC
AGCAACCGCA CCTCCCACCA AGTAATACGA ACCTGTGCCA TGGAAGTGGC GTTAGACTAC
TGTGGACGCT TGAATACGCA CGTGACGGAG GATTGGTTGA CGGCATTTCC CTCCATCGAC
CGCATTACGG AAGCCGATTT GAATCTGTTC CGGAACGAAT TACCGAAACT TGTGGCCAAG
CAGGAACCCT ACTGTGCGGT AGTGGAAGAC TGCATCGTTG GTGATTTTGC CGAAGAGCAT
TGTCGCCCCG CTGCTTGTCC CTTTGTCGAT CCCGCCGCGT GCCGGTATCT GACGTGCTGT
CTCACCGAGC AAGTCTACGA AGAATACGCC GTGGCCATGG ATTTGGTTGA AAACGTCACG
GCGGGCACTT CCGCAAACAT TGACGCAGCC GACAAAGATA CGCC
|
|---|
| Protein sequence | MSRNRSRIPR RRYTWPKAAV VMTVMGWGLL LLVCTEAAQS SSSPSGTNTT RSRSTATGTT
DESSTSVTRV GNLDYLDAAT MAYYLDAPRW TADHPEHDVV VLFYAQWCRN CHAFAPLYDQ
MSKLLHAGTK DSQLVMGLFD CEQDKAHSRV CSDAGVTHYP TIMFLSSSGQ VLQRGRRSPK
VPLPKHITTF RGNWQYGDAV MDWIKTLRGL SHWHRAGWGK TLRNLLFGRR HRDPARERLP
TGIPSGTNRR DGTTTAGNGA THASHEQQEL RDEIRSLSDL VIRSSTIVDA LLFPVTAAAN
KTLSTNVIRD ENAKNYTDVF AFLRDAWHSN RTSHQVIRTC AMEVALDYCG RLNTHVTEDW
LTAFPSIDRI TEADLNLFRN ELPKLVAKQE PYCAVVEDCI VGDFAEEHCR PAACPFVDPA
ACRYLTCCLT EQVYEEYAVA MDLVENVTAG TSANIDAADK DT
|
|---|
| |