Gene PHATRDRAFT_49150 details

Gene Information

• Locus tag: PHATRDRAFT_49150
• ID: 7195650
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011689
• Strand: +
• Start bp: 73264
• End bp: 75216
• Gene Length: 1953 bp
• Protein Length: 650 aa
• GC content: 54%
• Product: predicted protein
• Protein accession: XP_002183805
• Protein GI: 219127152

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.544018
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGACTCA CACCTCGCGA CAGTGGTGAT AGTGGTGCAA CCAAGAAAGC GAACCGTTCG 
TGCTTGTACT CGGGATCGAT GAAGGCGTTG TCGAGAGCCT TCCTTACGCA TTTGCTCGCT 
TGCTGGATCG GCTACCAGCT GGGGTTTTCC GTGCAAACTT CCGTCACCAA AACAAGCACG 
GAGCCCTTCG TCAACCGCGA AGGTGCAAGC AAAAACGGAG TTTCATGGAT GAATGCTCGA 
CACATGGAAC AGCAAATGCA ACACCCCCAA GCAGTTCAAG CATGTCCGAA ACCAACGCCG 
TGTTCCTCAC AGCCAGAATC CGCCAGCTTT GATCACGACA ACTTTATCCC GGCAGAGTAT 
CGGAGTTTTG TGGCCGGTAT GAGTCGGGTG GACCGGACGG ACTTTGCCAG CCAGTACGAT 
ACTGGAATCC CGCTGGACAT TAAAGCAAAG GCGAACCAGA GATTGGAAAA ACATCAACAA 
GCGCTTCTCC TTCATATGAG TCCCCTGAGT GTGCCGGATT TTATTTCGTA TCGGCAAACC 
AACAGTAGTA CGGCGACGCG AGCTTTGCCG CTCCTATCCG CGGAGGACGC AACCCGCCAC 
TGTCACGTTG TCCAGGTGGT TCACGTGCGG TCGACCTTAC CACCCTTCCA ACGCCACTGT 
GTGGCCATTG TGCCGCAATG GGATGACGAC GCCACTGTGC ACAAGTTTAT GCGCGTCCCT 
GACGATTCTC ACTTTGCGAG TGTAAGAACG GGTCACCGGA ACGGGGCCCA GAACACTGGA 
GTCTTGAACG AATCGCTGCC CGCCCGGTAC GTTTCCCGAA CGCATACGGA AGGTGGGATT 
TATACCTCGG TGCCGGGACC GGGTAGGCGC TATTGGGACG AGCTCGCGCA GTATCACGCC 
ACACTGCCGA CTTTTTTGAA ACAGCTTGGT CCGATTGCCG ACCAGGCGGC CCGGAACCAA 
ACCATTGTTG TCATGACGTG CAATCAAGGT CAATCCGAAT TGCTGGTCAA TTTTGTCTGC 
AGCTGCACCC GTCGTGGTTT GCCAATATCA CACGTTCTGG TATTTGCGAC CGATACGGAA 
ACCTACAAAC TTGCCAAGTC ACTGGGGCTA CGAGCGTGGG ATGTAACCAG TCTCCCGGGT 
GCGTTCGGGG TGCGCTCCTT CCCCACGAAA GCAGCCGATG CCTACGGCGA TTTGACCTTT 
GCGGCACTCA TGATGGCGAA AGTGTACTGC GTTCATGTGG TGTTACTACT CGGTTACAAT 
GTCCTCTTTC AAGACGTCGA CGTCATTTGG TATCAAGATC CCGTGCCGTA CTTTGAGACG 
CACTGGACGA CTATGGATGT TATAATGCAG GACGACGGAG CCCGGACCAA GCGGTTTGCC 
CCTTATACGG GAAATTCTGG GTTTTACTTT GTGAGGAACA ACGAGCGGTC CCTGTATACT 
TGGGCCGCAC TCGCCCGTAT GGGCGACACA GTTGCGGTGA TGAAATCGCA TCAAGCCGTC 
CTCAATACCG TCTTGGAACA GCAAGCTTCG TGGCGCGGAC TGAAGGTGAA GACGTTGGGT 
CGATTCACGC CGGAGGGACT CTTGTTCCCG TGTGGGTTCC AATACCAGAA GCGTTTTGGT 
GTCTTCGAGC GGGCCGGTGA CGACGGTAAA GTGGCTCCAA TTGTAATGCA TATGAGCTGG 
ACGTACAACA AATCGGATAA GCTCAAATAT ATGAAACAAA TGGGTGATTG GTACGCCCGG 
GATGTGTGCA TACTGGACGA GGACATCGGC AATGCCAAGG CTGGCGAAGT AAAACTCGAA 
CAGATTATCG CGACGGCTTC GGCCGAGGCA GCGATCGACC ATTGCTGTGA AGTAGATCCG 
ATTGTGACTT GTTACTATCA AGACAAGCCC AGCAAAATAC CTTGCAAGGA CAGTCCAAAG 
AAGGAACCCA ACGGGATTCC TTTTTGGGAG TAA 

 

Protein sequence

MRLTPRDSGD SGATKKANRS CLYSGSMKAL SRAFLTHLLA CWIGYQLGFS VQTSVTKTST 
EPFVNREGAS KNGVSWMNAR HMEQQMQHPQ AVQACPKPTP CSSQPESASF DHDNFIPAEY 
RSFVAGMSRV DRTDFASQYD TGIPLDIKAK ANQRLEKHQQ ALLLHMSPLS VPDFISYRQT 
NSSTATRALP LLSAEDATRH CHVVQVVHVR STLPPFQRHC VAIVPQWDDD ATVHKFMRVP 
DDSHFASVRT GHRNGAQNTG VLNESLPARY VSRTHTEGGI YTSVPGPGRR YWDELAQYHA 
TLPTFLKQLG PIADQAARNQ TIVVMTCNQG QSELLVNFVC SCTRRGLPIS HVLVFATDTE 
TYKLAKSLGL RAWDVTSLPG AFGVRSFPTK AADAYGDLTF AALMMAKVYC VHVVLLLGYN 
VLFQDVDVIW YQDPVPYFET HWTTMDVIMQ DDGARTKRFA PYTGNSGFYF VRNNERSLYT 
WAALARMGDT VAVMKSHQAV LNTVLEQQAS WRGLKVKTLG RFTPEGLLFP CGFQYQKRFG 
VFERAGDDGK VAPIVMHMSW TYNKSDKLKY MKQMGDWYAR DVCILDEDIG NAKAGEVKLE 
QIIATASAEA AIDHCCEVDP IVTCYYQDKP SKIPCKDSPK KEPNGIPFWE