Gene PHATRDRAFT_49149 details

Gene Information

• Locus tag: PHATRDRAFT_49149
• ID: 7195649
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011689
• Strand: +
• Start bp: 70398
• End bp: 72420
• Gene Length: 2023 bp
• Protein Length: 570 aa
• GC content: 46%
• Product: predicted protein
• Protein accession: XP_002183804
• Protein GI: 219127150

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.536762
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATAAGA CCCTATTGAA TGGATCAGGT CCAATTCAAG GCTTGAAACA TCATGTACAA 
CAGCGTGGCG CTGAGGTGCT CTCCTCTTTT GACAAGAATA TCCCGCCTTG GCCGACGCAT 
TTTGTCGTGA GTGAACAAGT CCAGGAGCCA CTTTCGATTG CACAAGCACT GGGTTTCGAT 
TCCTTGGAAG AAATGTCATC TTTTCTGTAC GACCATAGCA TTGTTTGCGC CACGCGGAGG 
TGGGTTCATC GCGGGGATCG ACTGGACAAG CCGCCTCTGG AGGAACCTAC CATGATGGAA 
ACGTATCTTG GAATAGGTCC TAAGCGAAAA TGCAAACGAC ATAGAACGAA CAAAAATGAA 
GAGTCGAACG ATTCGCAAAG TTCACGGTCG AATGTTTACA AAACTAACCA ATCTCTATCG 
GAAGCCTTTC GGACCTTGTC TAAACGTCAC CAGGAAATGC CGCTGAACGG AGAACTGGAT 
GCTTGGAAGT CTTATTCGTT TCAAATTACG GCGGGTCGAT TGCTGCATCT AGGCTTCGAA 
ATCAGAGATA GCCCGGAGGT TCTTCGCCAT CTCGCGTCGA TCAACGGGTT CGGCTCGTCG 
ACGATGGATA TCATTACAGA TTATCTACGA ACGCAGCAGT GCAGCCGTTT GCGTAATCTG 
GAATCAGATC CGGATCGGGT TGCTATGAAG AATATGATGA ATATCTGGGG TGTAGGTCGG 
GTTCGAGCCA AGGAGTTGGT GGATGCTGGC TTTAAGAGGA TTAATGAGGT TCGGCAAGCT 
GTCGAATTAG GGAACCTACA ATTGGAAAGA AACCAATACA TTGGCGTATT GTGTTACGAC 
GATTTGCTGG AAAAGATGGA TCGAACGGAA GTCGAAAGTA TCGGTAAGAT TATATCTAAC 
ATTTTCAAAA TGTCCTATCC TGAGGCGGAA GTGTGTGTAA TGGGAAGCTA TCGACGAGGG 
AAGCACGCTT GCGGGGATGT TGACATTCTT ATTACACACG AAGATTATAA TCACACGGTC 
CCACCGAAAG CACTGGGACA ATTTATCGAC GAACTACGGC AACAGGGACA CATCGCATAT 
CACTTGACAT TTATCTCCGG CATGAAGCAT GAGCTATATG AAACAATCCC AGATGCACCA 
AGTCACTGGT CGCCGCAGCG CGACAAACGA GACAAATCTT CGAGCAGCTC CTATATGGGT 
GTTTTCAAAT CACCTTGTAT GACGGGTAAG AAGCGCCGAG TTGATATTAA ATTTTATCCT 
TGGCGAGAAA AGGCTTTCGC GAGTCTTTAC TTCACCGGAA ATGGCTACTT CAATCGATCG 
ATGCGCCTTT GGGCAACACG CAAATTCAAC TATACGTTAA ACGACCATGG TGTTTTCGAT 
CGAGGATCTC TTGTTCGCGT TTTAGACACG ACTTCCGAAA AAGAAATTTT TGAATTTCTT 
GATATAAGTT GGAGGGAACC CAAGGAAAGA GATTCCTTTG ACGCTGTGAA AGGCAAGAAA 
AATGGCGAAA GTGCAGCGCA ATTAGAAGGT TTTTCAAGGT CAGAGGTTTC ACGAGAGTCA 
AGAGATCACA GATGGATTGT GTAAACAGCT TTTGGCCGCT GTTGCCTGGC ACAGGCTGTG 
CATATTGAAC GCAACATTGT CAAATGATCA ATCATTTAAA CTTCGAGTCT CGATATATTT 
TACATTAGCT CGCATCGACA AGGCTTTTTA CGATTGATAT TCCGCACTTG TCCGTGAAAA 
CGAACTTCTC GTATACCTTC AACGAGTGAA AGCAAAATAT CCTCTTATGC ACGAAAGAGA 
CGCCGTCTTC TAAACAGAGT CCGGTATTGC TGCTACCGCT ACTATCAGTT TCACGTCGTT 
CCGTGAGCTC AGTGGGAAGG GACGAAACAC GACATCTGGT GGAGCTCCAC TTGACAGGCC 
AATCCCGGCA TCGACACGAT TCCTTGTCCC ACACAACAAG ATTCCTCGCG ATGACGTTAT 
GCACAACCAA CTCTACGACT CGAAAGCACT AACGAAAAAC TGA 

 

Protein sequence

MNKTLLNGSG PIQGLKHHVQ QRGAEVLSSF DKNIPPWPTH FVVSEQVQEP LSIAQALGFD 
SLEEMSSFLY DHSIVCATRR WVHRGDRLDK PPLEEPTMME TYLGIGPKRK CKRHRTNKNE 
ESNDSQSSRS NVYKTNQSLS EAFRTLSKRH QEMPLNGELD AWKSYSFQIT AGRLLHLGFE 
IRDSPEVLRH LASINGFGSS TMDIITDYLR TQQCSRLRNL ESDPDRVAMK NMMNIWGVGR 
VRAKELVDAG FKRINEVRQA VELGNLQLER NQYIGVLCYD DLLEKMDRTE VESIGKIISN 
IFKMSYPEAE VCVMGSYRRG KHACGDVDIL ITHEDYNHTV PPKALGQFID ELRQQGHIAY 
HLTFISGMKH ELYETIPDAP SHWSPQRDKR DKSSSSSYMG VFKSPCMTGK KRRVDIKFYP 
WREKAFASLY FTGNGYFNRS MRLWATRKFN YTLNDHGVFD RGSLVRVLDT TSEKEIFEFL 
DISWREPKER DSFDAVKGKK NGESAAQLEG FSSFTSFREL SGKGRNTTSG GAPLDRPIPA 
STRFLVPHNK IPRDDVMHNQ LYDSKALTKN