| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_49136 |
|---|
| Symbol | |
|---|
| ID | 7195639 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011689 |
|---|
| Strand | + |
|---|
| Start bp | 26683 |
|---|
| End bp | 28314 |
|---|
| Gene Length | 1632 bp |
|---|
| Protein Length | 433 aa |
|---|
| Translation table | |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002183794 |
|---|
| Protein GI | 219127130 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGGACT CGTTAGGCTA CTCTCAGTCA CCGTTTCGGG AGGCGAGCTT TCCTGTCAAG
TTGCACCATA TGCTCACATC CGTAGAAGAG GAATGCAATC AGGGGATTGT TTCATGGCAG
CCTCACGGCA GGGCCTTTCT TGTTTTCGAT ATAGAAGCTT TCGTCAATGA TGTCCTTCCC
AAGTGAGTTC CGACTCGTCA CCATACCCGT TAACGTGCTT CGGCCTCCTT TGCCTTCGCA
CGGCACGATG GCTGAAATGA TCAACTAACC CTTCTTCATC AGGTGGTTCC GACAGACCAA
GTTCCAGTCG TTCCAGCGAC AATTGAACAT TTACAACTTT AAGCGAATCT CCGTAGGTGA
GTTGCACTTC TTTATTGGGT TCCTGCGGCT CTTCTTGACA AGAGTCGATT GCAAAAACAC
CGAAGCAATA TCTTACCACG TGTTCTGGAC CATGATCTAC GCTATCGCTA CCTTGCTGTC
TGACAATGGC AGGCCGTGAC AAGGGAAGCT ACTACCACGA GTTTTTCCTC CGTGGCCAGC
CCCACTTGGC CGCCAACATT CCGCGCATCA AATTAAAAGG TACGAGTAGT CGAAAGCCTC
TGATACCTCC AGCGGAGCCC GATTTTTACT CCATGCCCTA CCTTGGACCC ATACGTGGGC
CAGCCGATGT CAGTCGCATC CCGGTAACGG AAAGGATAAG CAGCAATGCT GGCTTACAAT
ATCCAAAACA GTAGCAGCAT TCCGGCTCTG TTCGCGTCAC AGCCAAATGA TTTATCCAGC
GTTGCGTTCT CGGCGTCTAT GATTGCACCT CCGGCTTATC ATCTTTCTTC GTTCGGAACT
TCCGAGCTTG AACTCCTTGT AACTTTAAGA AGCATACTGT CCTCCACCCC ACCTCCCGCT
CCTTCCTCCG CCTACTGGGC CTCACTCCAA ACAAATCAAG GATCAGGACT CTCCAACACA
TGGCAACAAG GTGTACAACA CCAAAACGAA GCCTCAGCTC TCCTGCAGCA GCTCCTTTCC
TCAAGTCTCT CGTCGCAAGT TCCGCCGGCT AGTTTTGCGC AAAATCAATC ATCGCCACAA
GACTTTCTCC CAGCCGCTGC ATTCGCACAG CAATCGCTGA CGCCCGAATA TCTAAATGTT
GCATTGACGA ATACCTTAAA TCGCCAGGTA GTCGCCCCAA CCAGCCAGGA AATTGCATCG
TTCCTACAAC GGCAGCGCAA CCTTCCAAGA TCCGAGCCCG TTCCTTCCGA AACACTAGCG
GCTTTGGTTG GACAGTCTTC CTATCAGGCA TCTTTACGGC AACCACAAGC GTTCTTCAGT
ACTGGGCAAC AATTTCGGTT GGGAGACCGT AATGCCGAAG GCCATTTTAC CACCGATTCG
GCGGCCACTG CGCAGCTGGG CAGCAACGAC AACAGCAGCA GCGGTAACGT GAATAGGGGA
TCAAGCGACT TGCCTGACCT GGCTCGTCTC TTGGTGGCCA CAACGACACC TCCACCTTCC
ATGGATGCGG TGGCCCAAGT CTTGTTGTCG GGCCTTGCAT CAGCACCGGC AACAGAAGTG
CTCTCGAATC GCAAGAAAGC TCCGGAAGCC GCGCCAACGG TTCAGCCCCA GCAACCGAGC
AGAAGTAGCT AA
|
|---|
| Protein sequence | MEDSLGYSQS PFREASFPVK LHHMLTSVEE ECNQGIVSWQ PHGRAFLVFD IEAFVNDVLP
KWFRQTKFQS FQRQLNIYNF KRISVGRDKG SYYHEFFLRG QPHLAANIPR IKLKGTSSRK
PLIPPAEPDF YSMPYLGPIR GPADPNDLSS VAFSASMIAP PAYHLSSFGT SELELLVTLR
SILSSTPPPA PSSAYWASLQ TNQGSGLSNT WQQGVQHQNE ASALLQQLLS SSLSSQVPPA
SFAQNQSSPQ DFLPAAAFAQ QSLTPEYLNV ALTNTLNRQV VAPTSQEIAS FLQRQRNLPR
SEPVPSETLA ALVGQSSYQA SLRQPQAFFS TGQQFRLGDR NAEGHFTTDS AATAQLGSND
NSSSGNVNRG SSDLPDLARL LVATTTPPPS MDAVAQVLLS GLASAPATEV LSNRKKAPEA
APTVQPQQPS RSS
|
|---|
| |