Gene PHATRDRAFT_49131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_49131 
Symbol 
ID7195637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011689 
Strand
Start bp6944 
End bp7928 
Gene Length985 bp 
Protein Length250 aa 
Translation table 
GC content46% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002183792 
Protein GI219127125 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.501867 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAGCCA CTCGCTGTCG GACACCAATC GAGGAAAGAT TTTTCACGAA CTCATACAAA 
TCCGATTTCC TTGTGTCAAC CAACAAACAT CTGTCATTAC AATCGTCTCT CTATCATTTT
ATTCCAACAT CTTTATTCCA TCTATTCTCG TGCCCCGTAG AAGCTTTTGC AATGAAGTGC
CGCATTTTAA TTACCTGCTT ACTCGTCGGA AGTCTTGTGG ACGCTTTTAC TGTTTCATTT
CCTGGTTCTT TCCAGTCTAC TACGGCAGTC TTTCTCAAGC CGAAGCAGGG CAAGCAGTTG
GAGGCTGCTT TCAATGCGGC ATACACACCC AATAAAGACC AGGTTGGGAT TAATGATGCC
CCGGTCGTTC CAAGTGTCGC TGAAGGAAAT GCTTTGCACG AGTTAAGGTC CTCCCCCACC
TCTGCAGCAC TCTCTTTTGT GCAGCGCGTC TTTTCTCTTC CTTCTTCCAT GATAAAGCGA
CATCCACATC CCAAGATTGA GGGCCTTCCG ACCTTGCCAA GAGAATCTGC GGATTCATTT
CACGATGATG TGATCTTGTA TCCTGTAGTT GGTTTCACCT TTGTAAGGGA CGCGAAGGAT
CACTGCCGGG CTTTGCCAAA GCTCCCGAAC CCCTCGTGTC GGATCTATGC GTCGCAAGAA
CCGCTTTACG GCTGGTTTAG TCCAGCATGC ACTTTGAACC CTTTTGCGGA TGACTATTGT
GCTAAGCGAA AGCAAAATGA GCTTAAAAAG TAGGACTAGG GCAACCTGTC TGGGGGCAAC
GCTATTGAAA AACCTATGAT ATACCCTCGC CATTGCTGTC CAGCTGACTC TTCGTGATAA
GATCTTTACC TACCAGCCTT CATCGCCCAA GATTTTATTC GATACACCAC GAAATCATAC
ATGCATATGG TATGCTTGCC CCAATCATTC ATTCTTTGAC ATCATTAGCA TGTAAAACCT
CAGTAAATTT GACGTAACAC TTGCA
 
Protein sequence
MGATRCRTPI EERFFTNSYK SDFLVSTNKH LSLQSSLYHF IPTSLFHLFS CPVEAFAMKC 
RILITCLLVG SLVDAFTVSF PGSFQSTTAV FLKPKQGKQL EAAFNAAYTP NKDQVGINDA
PVVPSVAEGN ALHELRSSPT SAALSFVQRV FSLPSSMIKR HPHPKIEGLP TLPRESADSF
HDDVILYPVV GFTFVRDAKD HCRALPKLPN PSCRIYASQE PLYGWFSPAC TLNPFADDYC
AKRKQNELKK