Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_49131 |
Symbol | |
ID | 7195637 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011689 |
Strand | + |
Start bp | 6944 |
End bp | 7928 |
Gene Length | 985 bp |
Protein Length | 250 aa |
Translation table | |
GC content | 46% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002183792 |
Protein GI | 219127125 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.501867 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAGCCA CTCGCTGTCG GACACCAATC GAGGAAAGAT TTTTCACGAA CTCATACAAA TCCGATTTCC TTGTGTCAAC CAACAAACAT CTGTCATTAC AATCGTCTCT CTATCATTTT ATTCCAACAT CTTTATTCCA TCTATTCTCG TGCCCCGTAG AAGCTTTTGC AATGAAGTGC CGCATTTTAA TTACCTGCTT ACTCGTCGGA AGTCTTGTGG ACGCTTTTAC TGTTTCATTT CCTGGTTCTT TCCAGTCTAC TACGGCAGTC TTTCTCAAGC CGAAGCAGGG CAAGCAGTTG GAGGCTGCTT TCAATGCGGC ATACACACCC AATAAAGACC AGGTTGGGAT TAATGATGCC CCGGTCGTTC CAAGTGTCGC TGAAGGAAAT GCTTTGCACG AGTTAAGGTC CTCCCCCACC TCTGCAGCAC TCTCTTTTGT GCAGCGCGTC TTTTCTCTTC CTTCTTCCAT GATAAAGCGA CATCCACATC CCAAGATTGA GGGCCTTCCG ACCTTGCCAA GAGAATCTGC GGATTCATTT CACGATGATG TGATCTTGTA TCCTGTAGTT GGTTTCACCT TTGTAAGGGA CGCGAAGGAT CACTGCCGGG CTTTGCCAAA GCTCCCGAAC CCCTCGTGTC GGATCTATGC GTCGCAAGAA CCGCTTTACG GCTGGTTTAG TCCAGCATGC ACTTTGAACC CTTTTGCGGA TGACTATTGT GCTAAGCGAA AGCAAAATGA GCTTAAAAAG TAGGACTAGG GCAACCTGTC TGGGGGCAAC GCTATTGAAA AACCTATGAT ATACCCTCGC CATTGCTGTC CAGCTGACTC TTCGTGATAA GATCTTTACC TACCAGCCTT CATCGCCCAA GATTTTATTC GATACACCAC GAAATCATAC ATGCATATGG TATGCTTGCC CCAATCATTC ATTCTTTGAC ATCATTAGCA TGTAAAACCT CAGTAAATTT GACGTAACAC TTGCA
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Protein sequence | MGATRCRTPI EERFFTNSYK SDFLVSTNKH LSLQSSLYHF IPTSLFHLFS CPVEAFAMKC RILITCLLVG SLVDAFTVSF PGSFQSTTAV FLKPKQGKQL EAAFNAAYTP NKDQVGINDA PVVPSVAEGN ALHELRSSPT SAALSFVQRV FSLPSSMIKR HPHPKIEGLP TLPRESADSF HDDVILYPVV GFTFVRDAKD HCRALPKLPN PSCRIYASQE PLYGWFSPAC TLNPFADDYC AKRKQNELKK
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