| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_42276 |
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| Symbol | |
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| ID | 7195516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011689 |
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| Strand | - |
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| Start bp | 221712 |
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| End bp | 225503 |
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| Gene Length | 3792 bp |
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| Protein Length | 1263 aa |
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| Translation table | |
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| GC content | 54% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002183951 |
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| Protein GI | 219127456 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.331707 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGTCCA CGAGTGCCAC CACGATCATT CCGGGCGACG GCAAGTTCCA TTTCGCGATC
GATCGCGGTG GTACCTTTAC GGACATTCAC TGCCGGTTGC CGAATGGTGA CGAAATTGTC
CGCAAACTGC TTTCGGAAGA CCCTTCTCAC TACCAAGATG CTCCCACGGA AGGAATTCGT
CAAGTCTTGG CGGAATTCGA TACCGAACGA TTGTACAATC GCGGGATTCC GGTCGAAACG
TCCCAGATTG GTTCCATCCG TATGGGCACC ACCGTTGCTA CCAACGCGTT GTTGGAACGA
GACGGAGCCC GCATGGCCTT GTTGACTACC AAGGGATTTG AGGATTTGTT GGAAATTGGC
AACCAGGCGC GGCCCAACAT TTTTGATCTT TCGTGTGCGA AACCCTCTCT CTTGTACGAA
AAAACCGTCG CCATTGACGA ACGTCTCGTC CTCGCACAAT TTACACCCGA CGAGTACCGC
GACCGCTACA CGGCGCACGA GGGCGTCACC GGAGAAACCG TATACGTGGT ACGGGAACCC
AATCTCACAG CCGTTCGTGC CGTGCTCGAG TCACTCAAGG CCGACGGAAT TACAGCGATT
GCCGTCTGTC TCATGCACGC CTACGTCTAC GGCGCCCACG AAGACATGAT TGGGGCACTG
GCCGAGAGTG TCGGCGGCTT CGAACAGATT TCCCTCTCAC ACCGCGTCAT GCCCATGGTG
AAACTCGTCA GTCGGGGACA CACCACCTGC GCAGCAGCCT ACCTGACTCC CAAAATTACT
ACCTATCTAC TCTCCTTTCA GAAAGGCTTT GACGCGAATC TCGCCAACGT GCCCCTCACC
TTTATGAAGT CTGACGGGGG CCTCGCACCG GTGCACTCCT TTGGAGGTCA CCAGGCCATT
CTCTCCGGTC CCGCAGGTGG CGTCGTGGGC TACGCCAAGA CGAGTTACAA GCCCGGCTTT
CCCGTAATCG GCTTTGATAT GGGCGGCACA TCCACGGACG TCTCCCGTTA CGACAATGCG
TGGGAACACG TGTTGGAAAC CGTCACAGCC GGCGTCGCTA TTCAAGCCCC GCAGCTCGAC
ATTCATACCG TGGCCGCCGG AGGCGGCAGT CGCTTGTTTC TGAAACGTGG CATGTTCGTG
GTCGGACCGG AAAGTTCCCG GGCTCATCCC GGTCCCGTGT GTTACCGCAA GAATGGGTAC
CTGGCCGTTA CGGACGCCAA CGTTGTGCTG GGTAGGGTTG TTCCCCGGTA CTTTCCATCC
ATTTTTGGCC CCAACGAGGA CGAACCACTC GACGTGGACG GTGCGCGCGC GGCGTTTGAG
GAACTGACCA AATTGCCAGA AGCGCAGGGC CGATCAGCCG AAGAACTAGC CTTTGGCTTC
CTACAGGTAG CCAACGAAGC CATGTGTCGT CCAATTCGAA ATTTGACGCA AATGAAGGGT
TTCGATATTA CCACCCACAC GTTGGCCTGT TTTGGTGGAG CCGGGCCGCA GCACGCTTGC
GCCATGGCCA AAGCGCTCGG TATGAAACGA GTCTTTGTCC ACCGCTTCGG TGGCATCTTG
TCGGCGTACG GATTGAGCCT AGCCGATGCC GTCCACGAAG AGCAAGAACC TACTGCCGAG
ACGTATCACG GAGGCATTTC CGAATCGGGT CAAACCCGAT TGCAAGCCTT GGCGGAGAAG
GCCCAGAGTA TGTTGACGGT ACAGGGCTAC GACGCTTCCG AAATTGTGAC GGAACGATTT
GTCAATATGC GTTACGAAGG AACGGACAAC GCAATTATGA TTCAAGAAAC AGCCGACGCG
ACACTGGATG ACTCCTTCCG GGCCCTGTAC ATGCGCGAAT TTGGGTTCGT CTTGCAAGGC
CGGGACATTT TGATTGACGA CTACCGCGTA CGGGCCGTCG TCCCCGGAGC CACTCCGCCA
CAATGGCCAT CTCCGGAAAA TATCGGCGCG CCAACACCGA TTGATACCAC CAAAGCCTAT
TTCGAACACG GTTGGGAAGA CGTGCCTGTT TACAAAGCCG AAGACCTGTT GCCGGGTCAT
GCCGTAAAAG GCCCTAGTAT TATTGTACAG CCTATTTCCA TTGTTGTACT GGAAATCGCG
TGTGAAGCGC TTGTGACTGC TACGGGTGAC CTAGAAATTA CGGTCGGTAA CTGCCACGAG
CAAGTCGTTG AGGAAGAATC CAGCGAGGCC CAAATTAAGG AAGATCCGGT TCAACTTTCG
ATCTTTGCGC ACCGCTTCAT GGGGATCGCC GAGCAAATGG GACGAACACT CCAGCGCACA
GCTATTTCGG TCAACATGAA GGAACGGCTC GACTTCTCGT GCGCACTGTT TACCAAAAAT
GGTGGACTGG TGGCGAATGC TCCTCATATT CCGGTCCACT TGGGAGCTAT GGAACGAGCT
GTGAGTTTCC AAGTAGAGTA TTGGAACAGT GAAGGTCGGG AAAGCATCAA GGAGGGGGAG
GTGCTGGTGT CGAACCATCC ACAGCTGGCG GGGGGCTCTC ATTTGCCTGA TATTACGGTT
ATCACGCCAG TCTTTCACGA AGGTAAAATA ATCTTCTTCG TGGCTAGTCG CGGTCACCAT
GCCGACATTG GAGGTATCGC TCCTGGGTCG ATGCCACCCC ATTCCAACAA GCTCGAAGAC
GAAGGTGCCA TGATTATCGC CTTTAAGCTG GTTCGCGATG GCAAATTTCA GGAAGAGGGC
ATAACGGAAA TTTTACAGTC CCCTGGAAAA TTACCGGGCA ACTCAGGAAC GCGCAACTTG
CGGGATAACA TGAGTGATCT ACGTGCTCAA GTAGCTGCCA ACAATTCAGG AATCCGTTTA
CTGACGGAAC TCGTGCAAGA GCACGGGCTG CATCACGTTG AAGCGTACAT GCATTTTATC
CAAAAGAACG CAGAAATTTT GGTGCGCAGA ATGCTTCGGG ACTTTTGCAA GGAGCATGGT
AATCGGGCGC ACGCGATCGA TTTCATGGAC GACGGGTCGC CAATTGAACT AACTATCGAT
ATCGACCCAA ATACTGGTTC AGCAACCTTC GATTTTACCG GGACAGGCCC GCAAGTGTTG
GGAAACCACA ATGCTCCTCC GGCTGTCACT TACAGTGCCG TCATTTACTC ATTGCGTTCA
TTGGTCGCGG AAGATATTCC ACTAAATCAA GGGTGCTTAG CTCCCATCAC GTTCATTATT
CCACAAAATT GTTTGCTAAA TCCATCGTCA GATGCTGGTG TGGTTGGAGG CAATGTTCTT
ACAAGTCAAC GTGTGGTGGA TGTCGTCCTA AAAGCTTTCC AAGCCTGCGC AGCGAGCCAG
GGGTGTATGA ATAACTTGAC CTTTGGCGAC AAGGAGTTTG GCTACTATGA AACTATTGCT
GGTGGAGTTG GTGCGGGACC CTCATGGGAC GGTCCATCGG GCGTTCACAC GCATTGTACC
AACACACGAA TTACCGACCC CGAAATTTTA GAACGCCGCT ACCCAGTTTT GCTCCAGGAG
TTTTCGCTTC GCCGTGGTAG TGGCGGTCGT GGGCGGCATC AGGGAGGTGA CGGGGTCGTT
CGGGAGTTGG AACCATTACG ACCGTTGACG ATGAGCATTC TCAGTGAGCG TCGAACTTTG
CATCCATATG GTATGGCTGG CGGAGAGGAT GGTGCGTGTG GAAAAAATCT ATTAGTCCGC
AAGGATGGTA TTACTGTGAA TATGGGTGGT CGATGCAGTA GCTCGATCAA TACGGGAGAG
CGTTTGCGCA TTGAAACGCC GGGAGGTGGA GGCTACGGAG CCTTTCCGGA GGAAAAGAAG
AGTCCTTCGT AA
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| Protein sequence | MTSTSATTII PGDGKFHFAI DRGGTFTDIH CRLPNGDEIV RKLLSEDPSH YQDAPTEGIR
QVLAEFDTER LYNRGIPVET SQIGSIRMGT TVATNALLER DGARMALLTT KGFEDLLEIG
NQARPNIFDL SCAKPSLLYE KTVAIDERLV LAQFTPDEYR DRYTAHEGVT GETVYVVREP
NLTAVRAVLE SLKADGITAI AVCLMHAYVY GAHEDMIGAL AESVGGFEQI SLSHRVMPMV
KLVSRGHTTC AAAYLTPKIT TYLLSFQKGF DANLANVPLT FMKSDGGLAP VHSFGGHQAI
LSGPAGGVVG YAKTSYKPGF PVIGFDMGGT STDVSRYDNA WEHVLETVTA GVAIQAPQLD
IHTVAAGGGS RLFLKRGMFV VGPESSRAHP GPVCYRKNGY LAVTDANVVL GRVVPRYFPS
IFGPNEDEPL DVDGARAAFE ELTKLPEAQG RSAEELAFGF LQVANEAMCR PIRNLTQMKG
FDITTHTLAC FGGAGPQHAC AMAKALGMKR VFVHRFGGIL SAYGLSLADA VHEEQEPTAE
TYHGGISESG QTRLQALAEK AQSMLTVQGY DASEIVTERF VNMRYEGTDN AIMIQETADA
TLDDSFRALY MREFGFVLQG RDILIDDYRV RAVVPGATPP QWPSPENIGA PTPIDTTKAY
FEHGWEDVPV YKAEDLLPGH AVKGPSIIVQ PISIVVLEIA CEALVTATGD LEITVGNCHE
QVVEEESSEA QIKEDPVQLS IFAHRFMGIA EQMGRTLQRT AISVNMKERL DFSCALFTKN
GGLVANAPHI PVHLGAMERA VSFQVEYWNS EGRESIKEGE VLVSNHPQLA GGSHLPDITV
ITPVFHEGKI IFFVASRGHH ADIGGIAPGS MPPHSNKLED EGAMIIAFKL VRDGKFQEEG
ITEILQSPGK LPGNSGTRNL RDNMSDLRAQ VAANNSGIRL LTELVQEHGL HHVEAYMHFI
QKNAEILVRR MLRDFCKEHG NRAHAIDFMD DGSPIELTID IDPNTGSATF DFTGTGPQVL
GNHNAPPAVT YSAVIYSLRS LVAEDIPLNQ GCLAPITFII PQNCLLNPSS DAGVVGGNVL
TSQRVVDVVL KAFQACAASQ GCMNNLTFGD KEFGYYETIA GGVGAGPSWD GPSGVHTHCT
NTRITDPEIL ERRYPVLLQE FSLRRGSGGR GRHQGGDGVV RELEPLRPLT MSILSERRTL
HPYGMAGGED GACGKNLLVR KDGITVNMGG RCSSSINTGE RLRIETPGGG GYGAFPEEKK
SPS
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