Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_39908 |
Symbol | |
ID | 7195537 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011689 |
Strand | - |
Start bp | 339192 |
End bp | 339776 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | |
GC content | 43% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002183972 |
Protein GI | 219127500 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCGCAA CTCCTCCTAA GATGCCGCTG CCAGAAGTTC GTCGAGCTGC TGTGCAGCAT GAGATCCGAA TTGTGGAAGC TCGTCAAGAA CTGCAGCGAT CGAACAGTAA AAAAGAGCTC ATCAACGCTT TCAAAGCTGA AATGCTTCAA AAGGTAGAAG ATTATATGAC CGACATTAGC AAGCTGGAAC GCAAGAAATG CGATTTGAAA ATGTATAAAG ACGAGCTTTT GATAAAGGTA GAAGATCACA TGAGCGATCT GAGCAATCTT GACAAGAAAA AGGCCGAACT GGCATCATTC AAGGGTGAAA TGCTCGACAA AGTCGATCAG CACATGAGAG AACTCGAGCG TATGCAAACG AAGAATGCTG ATCTCGTTAC ATTCAAAGAC GAATTATTGA CGAAAGTGGA AAATCATTTG AAAGTTTTGA AGCTTTCGCA AGATAAGGCC GCTGATGTGG CGAGGTTCAA AACGGAGATG CTTCAAAAGG TTGAGAAGCA CTCGCGCATG ACGGAGCTCA TGGCCGAAAA ACATATGCTC CTCAAAGATG TACTTTCAAA AAAAGTGGAA GCGTTTAAGC AGTAA
|
Protein sequence | MSATPPKMPL PEVRRAAVQH EIRIVEARQE LQRSNSKKEL INAFKAEMLQ KVEDYMTDIS KLERKKCDLK MYKDELLIKV EDHMSDLSNL DKKKAELASF KGEMLDKVDQ HMRELERMQT KNADLVTFKD ELLTKVENHL KVLKLSQDKA ADVARFKTEM LQKVEKHSRM TELMAEKHML LKDVLSKKVE AFKQ
|
| |