Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_39901 |
Symbol | |
ID | 7195533 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011689 |
Strand | - |
Start bp | 319578 |
End bp | 320937 |
Gene Length | 1360 bp |
Protein Length | 283 aa |
Translation table | |
GC content | 46% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002183968 |
Protein GI | 219127492 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000488323 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCAACT TTCTTGCGAT TGTTTGGCAT TTTGCTAGTC ATGGGAGCTC GTCGCTTATT GGCAGTGCTA GTTCAATGGA TATATTTCTG TGGTATGTTG TATCAATCTC ATTGGATGGC CCATGTATTT CTTCTTCAAG CACGGTCCCT ATAGCTTCCT CTCTAAAGCT CTCCCTAAAT ACTATTTATA TGTATTTAAA GGGACTGCGA GTGGCTTGCC TTTATTTTTG GTCTTCGTCT ATTTGGTGGA GTTGTTGTTG ATATGGATAC AATCTTCTGG GCCAAGACAC CAGACTACCT GAATGTACAG GATTACGACA CTTGTCGTGA AGCAGCGTCA ATCATCTAGT ATTCTGGGCT ACAAAATATG CTCCCATTTT ATGCTCGCTG CCTCGTTATT GTTTGTTTCA CAAGCGATGA TTCGTCAGGG TTCCTTTCTT TTAATATATG CGTACTTATA TAGAACCAAC CTATCCGTGT CTCGGAGGAC GGGTTTCTAA TTTTATCTTA CATTACTATG TCCACGCAAA CAATCAAACC ACTTCATCGA GATCCAGCGT TGTCCTTCGT GCTGCTGTCC AACAGTTAAG TCCCTGCTGT ATCTGTGGCA ACAAGTTTCG AGTATCACTT TGTTTGCATT CCCAAAAAGC CTGTGAGCCA AAAAGTGTTT TTATGTTTGG TCGATTTTCG ATTTTAAGAG AAGGGCATAA GTGTTTACTT GGATTTCGCG GCAAGGTCAT CCATCTTCGA ATTTTGGGAC ATTGGTGCGG CTTTTCCGTC GGGCCTTCGA GGCATGATGT GCTGCGGAGG TTGGCAAAAA TGTGGAACGT TAATGGGAGA GGTCAAAATT ACCAAGCAAC ATACTACTGA TGTATCTCCT GCTCATTTGG TCAAGTCCAT AGATATGCCA GCTGATCAAC TTATCAAGAC CAAACTAAGT ATTAGGTACA TCGATGCCCG GCGACTGGCT CAAGAGGCGG CGCAAGGTTT GGCATCCGGC GCAACTGAAG CAAACATCGT AGAAGAAGCG TGCGAACTTT TCGAGGACCT TGGCCACGAG GAGCAGGAGG CCATGAAAGC AGCCGCCGAT GCGGAGCCTG AGTGGAAGAG AAAAGCGCTT GAACAGGCTG AACGCCGAGA GCGAGAATGG GAGATCCAAG CAGCGCGTGA ACGGCAACAA ACGGACGGTA AAGCACAGAG TGCAACGATT GAGAACGACG ACGAAACTGG AGCATATGGA CCAGGTAGTG AAACAACAAC ATATACAACT GTCAAAAGGA CATCTACTAC AAGGGTAGTA CCAGTCGACG GGGGTCCTCA TCAGGTCGGA ACATCCGCCA GCTGTTGTGT TGTATTGTAG
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Protein sequence | MSNFLAIVWH FASHGSSSLI GSASSMDIFL WDCEWLAFIF GLRLFGGVVV DMDTIFWAKT PDYLNVQDYD TCREAASSIF EFWDIGAAFP SGLRGMMCCG GWQKCGTLMG EVKITKQHTT DVSPAHLVKS IDMPADQLIK TKLSIRYIDA RRLAQEAAQG LASGATEANI VEEACELFED LGHEEQEAMK AAADAEPEWK RKALEQAERR EREWEIQAAR ERQQTDGKAQ SATIENDDET GAYGPGSETT TYTTVKRTST TRVVPVDGGP HQVGTSASCC VVL
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