Gene PHATRDRAFT_39797 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_39797 
Symbol 
ID7195613 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011689 
Strand
Start bp53624 
End bp54118 
Gene Length495 bp 
Protein Length164 aa 
Translation table 
GC content52% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002183801 
Protein GI219127144 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGAAAG AATCTCCTTT GATCGATCGC TTGGGTGGGA CGCCCGTACT AAAACGGACT 
CTGGACGTGC ATTACGAACG CGTCTTGCGT GATTCTCTTT TGGCCCCCTT TTTCAAAGGC
ACCAAGATGT CGTCTCTCCG CCTGCATCAA CTCAAATTTC TGCGTTACTT CTTATCGGAC
GGCCGCATGA CGGTGGATGT CACGGACGTG ATGCTGGAAA AGCACATGTC CATGTTTGAA
GAGCGCGATT TGTCGGCCGT GCACTTTGAT CGTTTTGTTA CACTCTTTGT GGACTCTCTC
AAGGCCTGTG GTGTTCGATC ACAGGGATTG TTGGACGAAA CGCACGAAAT TATGGCACCC
TTGCGACAGA TTTTTGTGAT TGGTGCGCAA GAGTACGGCG GTTCCGTCAA GAGCCAAGAG
GATGCGGAAA CATCCAAGGA ACATAATCGA AAAGGGTTGC GACGCCTGTT GGGGCTGGGC
AAGCAGAAGG GCTAG
 
Protein sequence
MPKESPLIDR LGGTPVLKRT LDVHYERVLR DSLLAPFFKG TKMSSLRLHQ LKFLRYFLSD 
GRMTVDVTDV MLEKHMSMFE ERDLSAVHFD RFVTLFVDSL KACGVRSQGL LDETHEIMAP
LRQIFVIGAQ EYGGSVKSQE DAETSKEHNR KGLRRLLGLG KQKG