Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_39797 |
Symbol | |
ID | 7195613 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011689 |
Strand | + |
Start bp | 53624 |
End bp | 54118 |
Gene Length | 495 bp |
Protein Length | 164 aa |
Translation table | |
GC content | 52% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002183801 |
Protein GI | 219127144 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCGAAAG AATCTCCTTT GATCGATCGC TTGGGTGGGA CGCCCGTACT AAAACGGACT CTGGACGTGC ATTACGAACG CGTCTTGCGT GATTCTCTTT TGGCCCCCTT TTTCAAAGGC ACCAAGATGT CGTCTCTCCG CCTGCATCAA CTCAAATTTC TGCGTTACTT CTTATCGGAC GGCCGCATGA CGGTGGATGT CACGGACGTG ATGCTGGAAA AGCACATGTC CATGTTTGAA GAGCGCGATT TGTCGGCCGT GCACTTTGAT CGTTTTGTTA CACTCTTTGT GGACTCTCTC AAGGCCTGTG GTGTTCGATC ACAGGGATTG TTGGACGAAA CGCACGAAAT TATGGCACCC TTGCGACAGA TTTTTGTGAT TGGTGCGCAA GAGTACGGCG GTTCCGTCAA GAGCCAAGAG GATGCGGAAA CATCCAAGGA ACATAATCGA AAAGGGTTGC GACGCCTGTT GGGGCTGGGC AAGCAGAAGG GCTAG
|
Protein sequence | MPKESPLIDR LGGTPVLKRT LDVHYERVLR DSLLAPFFKG TKMSSLRLHQ LKFLRYFLSD GRMTVDVTDV MLEKHMSMFE ERDLSAVHFD RFVTLFVDSL KACGVRSQGL LDETHEIMAP LRQIFVIGAQ EYGGSVKSQE DAETSKEHNR KGLRRLLGLG KQKG
|
| |