| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_39785 |
|---|
| Symbol | |
|---|
| ID | 7195641 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011689 |
|---|
| Strand | + |
|---|
| Start bp | 31934 |
|---|
| End bp | 33203 |
|---|
| Gene Length | 1270 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | |
|---|
| GC content | 56% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002183796 |
|---|
| Protein GI | 219127134 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTGGCA AGAACAATGC CAGTCGCAAC GTCGACTACG CGATTCATGA GTCCACTTTC
CCCGTCAAGC TTCATTATCT TCTGAGCGAG ACGGAGGACA ACGGGAGCGA TCATATCATC
TCGTGGCAGC CCCACGGACG GGCCTTTCTA GTACACGACC ACGGGGCCTT TGTGGATCAC
GTCCTTCCCA AGTAAGTCAC TTCTCAACGC GTAACAGTAT TGGGTATGCG TCACACGGTG
GATGCCTTTG CCTATGATTG GGACACGGAG GAACCCGTGT ATCCTTTTAT GTATTACACC
TTGCGTTGTA CTGTGTGTTG TTGTTGTTGT TGCTTGGCAT TGCTTGGCAT TGGATCTTTC
TCTACTCACC CGTTGTTCAA AAGCTGGTTC AAGCAATCCA AGTTCCCTTC GTTTCAGAGA
CAGCTCAACT TGTACGGCTT CAAGCGCTTT ACGGCGGGTA AGTGGCGCGT ATTGTGTATG
TAGAGAGAGC TACGGGACAA TATTACTATG TGAGACCACT TCTCACGTGA TTCATTATTC
GTTCGTTGAA TCGTTCTTCG GGACCCGCAC AGGCCGCGAC AAAGGAGCCT ATTATCACGA
AATCTTCCTC CGTGGCCGAC CCCATCTTGC GCACCGCATT CCTCGCGTTA AAGTCAAGGG
CAGCGGGGTG CGCAAGCCGG GAGCGCCCGA GTCGGAACCC AACCTTTACC TCCGACCCTT
TTTGCTCACT TCGGACTTTA ACGGTGACGC CACGGCCGAG GAAGAATTGC ACACCGTCTC
CAAGAAACCC CACACCGTGA TCCCGGACGG TCCCAGCAGC CAGAGTGGAC CGGACGTGGC
CCGGATCGCC GGTAGAGCCC TGCCGGTTGG CTCCGTGGCG GCGCTGTACG CCAACGCTCC
GCCACCGAGA CCTCCTTTTC CGGGTCGCCC GTCGTTGCAT CACTTTCTGG CAGCGCAACA
CTGGTCCGGT CCTCCACGCG GGTTCGGTGT CCCGATGCAC AACCCTACCA TGAGAAGATT
CGACCCCACC GCTTTATCTC CGCACCAATT GATGTCCCTA CAAACCGCAC TGGAGGAAGA
CAATATTCGA CAGCGAGAAG CCCTCCTGAC TTCGTACGCC ACCTTCCCCG GACGGAGCTC
GGAGCCGGTG GCGCCATCCG CTAGTACCCT CCAGAAGTTG TCCAAGAAAT TCGCGGCGAC
GTCCGCGTCG ACCGCCGCCC AAGATGTAGC CACACTGCTC CAATTGGCTG CGTCCCTCGG
ATACCGCTAG
|
|---|
| Protein sequence | MGGKNNASRN VDYAIHESTF PVKLHYLLSE TEDNGSDHII SWQPHGRAFL VHDHGAFVDH
VLPNWFKQSK FPSFQRQLNL YGFKRFTAGR DKGAYYHEIF LRGRPHLAHR IPRVKVKGSG
VRKPGAPESE PNLYLRPFLL TSDFNGDATA EEELHTVSKK PHTVIPDGPS SQSGPDVARI
AGRALPVGSV AALYANAPPP RPPFPGRPSL HHFLAAQHWS GPPRGFGVPM HNPTMRRFDP
TALSPHQLMS LQTALEEDNI RQREALLTSY ATFPGRSSEP VAPSASTLQK LSKKFAATSA
STAAQDVATL LQLAASLGYR
|
|---|
| |