Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_30262 |
Symbol | |
ID | 7195602 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011689 |
Strand | + |
Start bp | 644476 |
End bp | 645795 |
Gene Length | 1320 bp |
Protein Length | 192 aa |
Translation table | |
GC content | 51% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002183910 |
Protein GI | 219127371 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.535143 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GACGAGGGTA GAACGAAAGC ATCACCATGG GCGGTACGTT TTAGTGGTGT TGATTCCAAC GTTATCTCGA GACACAAAGA ATAGAAAGGC GAAATACCGG TCGAACGTAA TGGTCGCTAT GTCGTTACTG GAAATAGAGC TTTTCATTGC GAGCCCGTTG TAACTCCGCA CGACAGGCTG GAAAGAACCT CTTTGGTCTA TCTATAAAGC ATTTTCGGCC TTTTGGATGC CCGGCGTAGA TTGATGCATT GCTCTGATTG TATCATATCC ATTGTGGCAC GTATTCGCCT CTTTTCGTTC GTGCGTTGTA CTTTGGTCGC GCATCGATCG TTCCTTGGAA AGCCTTGCAT CGATCGTCCC TCCTCGTGCA TATCTCGCTA CCTTCTTTGT GCTGTCTCTC ACGAGCATGT CTCATTTGCG TCTTCTAGTC TCTCTGAAAC TTCAAAAGCG CCTTGCGGCC TCCGTGCTCA AGTGCGGAAA GCGCAAGATT TGGTTAGACC CCAACGAAAT TAACGAAATT GCGTTGGCCA ACTCGCGCCG CAACATCCAA AAGCTGCACC GTGATGGTCT CATCATCAAG AAGCCCTCGG TTGTGCATAG CAGAGCTCGT GTGCAGCTGC GTAACGAAGC GAAGCGTAAG GGTCGTCATA CCGGTAAGTC GTCACCTATG AATCGTATAT TTACCGCCAT GGGAGGCCAG TGCCAGTTCC GGTATCGTGT CTGTTCCTTT AATGGCCAGA CGGTGGCCAA CCAAGGCGAA GAGTAGATCG GCGTCCTTAG CAGTAAGGCA TGCCGGCTGG CCAGACAACC AGAGGTCCAT CTTCCACGCA AGGTCCCTGC CTTTACCAGG GCTTTGTACT TTACACATCA CGTGACTACA GTTTGCTCAT ACACATTATT CTTGCTATTC GTTGTCAAAG GTACGGGAAA GCGCCGAGGT ACCGCCAACG CGCGTCTCCC TTTCAAGGTG ATCTGGATGC GCCGGTCCCG AGTGCTCCGA CGTCTTTTGA AAAAAATGCG CGATGCCAAG AAAATCGATA AGCACATTTA CCATTCCCTC TACATGCTCG CCAAGGGTAA CCAGTTCAAG AATAAGCGTG TTTTGATTGA AACCATCCAC GACATGAAGG CTGTCAAGGC CAAGGAAACC GCCCTCACCG TCCAGGCCGA AGCCCGTAAG GGACGCGCCA AGTCTCGTCT CGAGCGACGG GCGGCACGTG AAGCCAAGAA AATGGCGGAC AATGAAGCGG CTCAACAAGC CTCGTAAGTA CCGTAGCCTC GAAAACGGTA TAACACACAT AAAACAATGC TTTGTCCACC
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Protein sequence | MGVSLKLQKR LAASVLKCGK RKIWLDPNEI NEIALANSRR NIQKLHRDGL IIKKPSVVHS RARVQLRNEA KRKGRHTGTG KRRGTANARL PFKVIWMRRS RVLRRLLKKM RDAKKIDKHI YHSLYMLAKG NQFKNKRVLI ETIHDMKAVK AKETALTVQA EARKGRAKSR LERRAAREAK KMADNEAAQQ AS
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