Gene PHATRDRAFT_30262 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_30262 
Symbol 
ID7195602 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011689 
Strand
Start bp644476 
End bp645795 
Gene Length1320 bp 
Protein Length192 aa 
Translation table 
GC content51% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002183910 
Protein GI219127371 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.535143 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GACGAGGGTA GAACGAAAGC ATCACCATGG GCGGTACGTT TTAGTGGTGT TGATTCCAAC 
GTTATCTCGA GACACAAAGA ATAGAAAGGC GAAATACCGG TCGAACGTAA TGGTCGCTAT
GTCGTTACTG GAAATAGAGC TTTTCATTGC GAGCCCGTTG TAACTCCGCA CGACAGGCTG
GAAAGAACCT CTTTGGTCTA TCTATAAAGC ATTTTCGGCC TTTTGGATGC CCGGCGTAGA
TTGATGCATT GCTCTGATTG TATCATATCC ATTGTGGCAC GTATTCGCCT CTTTTCGTTC
GTGCGTTGTA CTTTGGTCGC GCATCGATCG TTCCTTGGAA AGCCTTGCAT CGATCGTCCC
TCCTCGTGCA TATCTCGCTA CCTTCTTTGT GCTGTCTCTC ACGAGCATGT CTCATTTGCG
TCTTCTAGTC TCTCTGAAAC TTCAAAAGCG CCTTGCGGCC TCCGTGCTCA AGTGCGGAAA
GCGCAAGATT TGGTTAGACC CCAACGAAAT TAACGAAATT GCGTTGGCCA ACTCGCGCCG
CAACATCCAA AAGCTGCACC GTGATGGTCT CATCATCAAG AAGCCCTCGG TTGTGCATAG
CAGAGCTCGT GTGCAGCTGC GTAACGAAGC GAAGCGTAAG GGTCGTCATA CCGGTAAGTC
GTCACCTATG AATCGTATAT TTACCGCCAT GGGAGGCCAG TGCCAGTTCC GGTATCGTGT
CTGTTCCTTT AATGGCCAGA CGGTGGCCAA CCAAGGCGAA GAGTAGATCG GCGTCCTTAG
CAGTAAGGCA TGCCGGCTGG CCAGACAACC AGAGGTCCAT CTTCCACGCA AGGTCCCTGC
CTTTACCAGG GCTTTGTACT TTACACATCA CGTGACTACA GTTTGCTCAT ACACATTATT
CTTGCTATTC GTTGTCAAAG GTACGGGAAA GCGCCGAGGT ACCGCCAACG CGCGTCTCCC
TTTCAAGGTG ATCTGGATGC GCCGGTCCCG AGTGCTCCGA CGTCTTTTGA AAAAAATGCG
CGATGCCAAG AAAATCGATA AGCACATTTA CCATTCCCTC TACATGCTCG CCAAGGGTAA
CCAGTTCAAG AATAAGCGTG TTTTGATTGA AACCATCCAC GACATGAAGG CTGTCAAGGC
CAAGGAAACC GCCCTCACCG TCCAGGCCGA AGCCCGTAAG GGACGCGCCA AGTCTCGTCT
CGAGCGACGG GCGGCACGTG AAGCCAAGAA AATGGCGGAC AATGAAGCGG CTCAACAAGC
CTCGTAAGTA CCGTAGCCTC GAAAACGGTA TAACACACAT AAAACAATGC TTTGTCCACC
 
Protein sequence
MGVSLKLQKR LAASVLKCGK RKIWLDPNEI NEIALANSRR NIQKLHRDGL IIKKPSVVHS 
RARVQLRNEA KRKGRHTGTG KRRGTANARL PFKVIWMRRS RVLRRLLKKM RDAKKIDKHI
YHSLYMLAKG NQFKNKRVLI ETIHDMKAVK AKETALTVQA EARKGRAKSR LERRAAREAK
KMADNEAAQQ AS