Gene PHATRDRAFT_30145 details

Gene Information

• Locus tag: PHATRDRAFT_30145
• ID: 7195620
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011689
• Strand: -
• Start bp: 100251
• End bp: 102510
• Gene Length: 2260 bp
• Protein Length: 471 aa
• GC content: 54%
• Product: hypothetical protein
• Protein accession: XP_002183928
• Protein GI: 219127408

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.542768
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CTGCGGGCTC CGTTTGCGTG TTTGGTTCGG TCGAGGAAGG AATTTATGCG AGTGCATCGT 
TCTTCGTTGT CGATCCAGAT CCGCGGCCAT CACTTTTGTA CCATTCGTGA CAACGTATTC 
CTTGTTTCCT CTCCAAGGTG ACACTGAAAT ATCTTTCGTT CTCTCTTGTT GCTCCCAATT 
GATTCACAGT CACTGTTATC ATCATTAACC ATGACGCTAT TGGTATCTCG AACGGTGCGG 
TCTTTGCTCC GCAAGGTACG TAAGCTAGCA GCAACGACGA CGACGAATAT CAACGGTGAC 
GGAACGGAAA GTAGCGCTCG CATTCTCCAG CCTTTTTGAG TTCGAGGACG AACCAACCCT 
TCCGCAATGC TTCGGCAAGG AAGGTTGTCG TCACAAGCTG ACTTGCTGTC GCCTTGCGAA 
GCAGCTTGGG AACCGACACA GATGGAGGCT GGGAAGCTAC CGTTTGCCAT TGTCCGCACT 
TTATCATACT TCTATTTTCC ATTACGATCT ATGAACCATA CTCACACGAC ACTTCCGACA 
CGTTGCTTCT GTTTTTGTTG GTCACTCGTC TTGTTGCGAG ACAGACGCCC TTTTCTACGA 
CTGGTACGAC CACACCCATC GGCGCGAGTA TCCGCACCGT CACGACACTG CAAGAGACGC 
TGGCGGCGCA AGTGCCGGAA AAGCAAAAGA AAATGGCCGA ACTTAAAAAG AGTTACGGAT 
CCGAAGTGTA AGTACAACTT CGTTTAGCGA TGCAGTTGTA GAGATACTGG CGCAGTCCGT 
TACCCCACGG CTGCCACCGG AAAATAGGTA GTACCGCGTC CACTGCGGGG CCCTTCTTGT 
TTCGTCCGCG CCCTCCTCTT ATCTGTTGGT ACACACACAG GCCCGACTCA ACCCCGCTGT 
TCTCTTTCTC AGGATCGGCC AAGTGACGGT GGACCAGTGC ATCGGTGGAG CTCGTGGTGT 
CAAGTGCATG CTCTGGGAGA CGTCCAACCT GGACCCCGAC GAGGGTATTC GCTTCCGCGG 
TCTCACCATT CCGGAATGCC AAGCCGTCCT CCCGACTTAT TCGGGCAAGG CTGGCGACGG 
CGAGCCCCTC CTCGAAAGTC TTTTCTGGCT GCTCCTCACG TCCGAGGTTC CCACCAAGGA 
ACAAGCCGAC TCCTTGACGG CCGATTTACA CTCGCGCGCC AAACTCCCCT CACACGTGGT 
TCCCCTGCTC AATTCGTTGC CCAAAGACAT GCATCCCATG ACGCAATTCA CTATTGGGCT 
CGCCGCCTGC CAGACGGAAT CCGTCTTCGC CAAAGCCTAC CAGGACGGCG TTCCCAAGAA 
TCTATACCAC GAGTACGCCT TGGAAGACAT TCTTTCCGTC GTCGCCAAGT TGCCAGAAAT 
TGCCGCCACG ATTTATCGCA ACGTCTACCA CGACGGAGTT GTGAGTCAGG ATACGTCGTT 
GGATTTTGCG GGAAACTTTT GCCGGATGCT CGGCTACAAC GATCCGTCGT TTGATGAGCT 
CATGCGTCTG TACCTGTGCA TCCACACGGA CCACGAGGGC GGCAACGCGT CGGCGCACGC 
CACGCACTTG GTCGGTTCGA CCTTGAGTGA TCCGTTCTTG TCGTACGCTG CCGGATTGAA 
CGCGTTGGCC GGTCCGCTCC ACGGCCTCGC CAACCAAGAA GTCCTGAAAT GGATCCAGGA 
GCTCAAGGAC AAGTTCGAGT CCGAAGGCAA ACCGGTGAAC GCGGAAACCA TTACCGAATT 
TGCTTGGGAC ACGCTGAACG CGAAAAAGGT GATCCCGGGC TACGGTCACG CCGTCTTGCG 
CAAGACCGAC CCCCGATACA CGTGCCAACG TGAATTTGCG TTGAAACACA TGCCCGACGA 
CGAACTCTTC AAGGTGGTCG ACACGATTTA TGAAGTCATG CCCGACATTT TGAAAGAACA 
CGGCAAGGTG GCGAACCCGT ATCCCAACGT GGACAGTCAT TCGGGCGTTT TGTTGTGGCA 
CTATGGGTTC ACCCAATACC AGTACTACAC TGTTTTGTTC GGCGTGAGTC GTGCGGTGGG 
TGGGCTATCG CAACTGTACT GGGACCGGGC TCTGGGCTTG CCCCTCGAAC GACCGAAATC 
CGTCACGCCG GAATGGATCT GGAGTCAGGT GCAAAAGTAG TGGTCATGGA CGTCGTTTCG 
TATTGGAACG CACAAATGGA TGGAGAGGAA TGAAATGCAC TTCTTTTGTG TCGGTGTATC 
AGTCCATTAG AAATAACTTT AGCCTACGCA GTTTGCAGTC 

 

Protein sequence

MTLLVSRTVR SLLRKTPFST TGTTTPIGAS IRTVTTLQET LAAQVPEKQK KMAELKKSYG 
SEVIGQVTVD QCIGGARGVK CMLWETSNLD PDEGIRFRGL TIPECQAVLP TYSGKAGDGE 
PLLESLFWLL LTSEVPTKEQ ADSLTADLHS RAKLPSHVVP LLNSLPKDMH PMTQFTIGLA 
ACQTESVFAK AYQDGVPKNL YHEYALEDIL SVVAKLPEIA ATIYRNVYHD GVVSQDTSLD 
FAGNFCRMLG YNDPSFDELM RLYLCIHTDH EGGNASAHAT HLVGSTLSDP FLSYAAGLNA 
LAGPLHGLAN QEVLKWIQEL KDKFESEGKP VNAETITEFA WDTLNAKKVI PGYGHAVLRK 
TDPRYTCQRE FALKHMPDDE LFKVVDTIYE VMPDILKEHG KVANPYPNVD SHSGVLLWHY 
GFTQYQYYTV LFGVSRAVGG LSQLYWDRAL GLPLERPKSV TPEWIWSQVQ K