| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_30139 |
|---|
| Symbol | Sec4 |
|---|
| ID | 7195643 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011689 |
|---|
| Strand | - |
|---|
| Start bp | 36459 |
|---|
| End bp | 37428 |
|---|
| Gene Length | 970 bp |
|---|
| Protein Length | 207 aa |
|---|
| Translation table | |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002183915 |
|---|
| Protein GI | 219127381 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ACCATTGCCG TCGTTCCGTT TGATCCTTTC GACTGTTTTG TAACGTTTTC CTTTTCTCGT
GTTGGGTTTC GTTCGTCTTT TCTTTACACC AACACTCACG AGTGTACCCG TAACAGTCGC
AGTAGCAACA GTAGTAGTAG TAGTCCAGCC CTAGTCCCAA AATGTCCCAA GCCAGCAACA
GCGCTCCGTA CGATATGCAG ATCAAACTGC TCATGATTGG CGACTCCGGT GTCGGTAAGA
CGTGTTTGTT GTTGCGGTAC GCCAACGACA GTTTCTCGCC AACCTTCATT ACGACCATCG
GCATTGACTT CAAGATCAAG AACGTGGACG TGGAAGGCAC GCGCATTAAG TTGCAAATCT
GGGACACTGC CGGACAGGAA CGCTTCCGCA CCATCACGAC TTCCTACTTC CGCGGAGCGC
AGGGAATCCT ACTCGTCTAC GACGTCACGG ATCGACGCAG CTTCGAAAGT ATCCGCAACT
GGATCTCGCA AATCCAGCAG CACGCCGACG TGCACGTCAA CAAGATACTG GTCGGGAACA
AGTGCGATAT GCTCGACGAA AAGGTCGTCT CCACGGAAGA AGGACAAAAG CTGGCTTCCG
AATTCGGTAT TCCGTTTTTC GAATGCTCCG CCAAGAACGA TATTCACGTC GAGAGCTCCT
TCATGCACAT TGCCAAGGCC GTCAAGGACC GCTTGAAGGC GGACGGACAA GGCGGACCCT
CGGCCAAGAC CGGACTCAAC CTGAAACCCA ACCAATCCGG TGGCAAAGAC AAAAAGTGTT
GCTAAACAAT GATTTCTCCG GAGGAAGGTC GCAACGAAAG GAGGAACATG GCGAGTGGAG
GCAGTCAATG CGTGCGGGTG GGCGGGCGTG GGTTTGGATG AGTGATAACG CTAGAAGTGT
AGGTGAGCCA GCGAGTTTCC AACCAACCAA CCCATCGAGT TTTTCTTTCT AGAAGAAGCA
AAAAGTATTT
|
|---|
| Protein sequence | MSQASNSAPY DMQIKLLMIG DSGVGKTCLL LRYANDSFSP TFITTIGIDF KIKNVDVEGT
RIKLQIWDTA GQERFRTITT SYFRGAQGIL LVYDVTDRRS FESIRNWISQ IQQHADVHVN
KILVGNKCDM LDEKVVSTEE GQKLASEFGI PFFECSAKND IHVESSFMHI AKAVKDRLKA
DGQGGPSAKT GLNLKPNQSG GKDKKCC
|
|---|
| |