Gene PHATRDRAFT_15848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_15848 
Symbol 
ID7195596 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011689 
Strand- 
Start bp596497 
End bp597165 
Gene Length669 bp 
Protein Length206 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184027 
Protein GI219127614 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.747848 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
AAAATTGTGG TTGCCAAGGA ACGCTTCTCA AAAGCCTACC GCCACCCCGT CTTGGATGAG 
CGGTTAACGA AACAGCGATG TCGAGCCGAA GCGCGCATTC TCGAAAAGTG CCAAATCAAA 
GCGAAGCTCG ATGTACCAAG TGTCATTAGA ATGGAAGCAC CAGTTTTGTA CCTGGAATGG 
ATTGAAGGGA TCACTGTTCG GGATTTCATT GAATCCATGC TGTCGGAAGA AACGGATTCG 
TCGCGCAAAG CCTGCAAATA TAAAACACTG CTGAGCGTCG CAAAGCAAAT TGGAACAATC 
ATAGGTACAT TGCACTCTTT CGGTATGGTA CACGGCGATT TGACAACCTC CAACATGATG 
ATACGTCGTG ACAGCGACAA TTGTACAACC GACTTGCCCA ACAAAAGCCA CACAGAAAGA 
ACAGGTATTC GTCTAGTGTT AATTGATTTT GGACTCTCGA AGAATACCGA GTCTGCGGAA 
GAGAGAGCCG TGGACCTGTA CGTTCTGGAA CGAGCGTTGA CGTCCACACA TCCGTCGCTG 
CCGGAAGGTT TTTACGAAGA AACGCTACTT TCGAGCTATG CAGAAACTGC TGGCACAAAG 
CACGAGGCAA CCTTGACCCG TCTCGAACAG GTCCGACAGC GCGGTAGAAA ACGAGAGTGC 
TTCGGATAG
 
Protein sequence
KIVVAKERFS KAYRHPVLDE RLTKQRCRAE ARILEKCQIK AKLDVPSVIR MEAPVLYLEW 
IEGITVRDFI ESMLSEETDS SRKACKYKTL LSVAKQIGTI IGTLHSFGMV HGDLTTSNMM 
IRQRTGIRLV LIDFGLSKNT ESAEERAVDL YVLERALTST HPSLPEGFYE ETLLSSYAET 
AGTKHEATLT RLEQVRQRGR KRECFG