Gene PHATRDRAFT_15797 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_15797 
Symbol 
ID7195592 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011689 
Strand
Start bp577903 
End bp578940 
Gene Length1038 bp 
Protein Length303 aa 
Translation table 
GC content58% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184022 
Protein GI219127604 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.23532 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTTGCGGGAG CCGCGGCGGG TGCCTTTTCC AAGACGGCCA TGGCTCCCGT CGAACGCGTC 
AAGCTCCTCC TACAACTACG GCACAGTGTA TACCCGCCTC CCGTAGCAAC CGCACCACTA
GCGACGACGA CGACGACACC GTTGGCCTCG CCATCGGCCT GGCACGTTGC ACGGGAAGTC
TACCAAACAC AGGGGTTCCG ATCGTTCTGG CGGGGAAATC TGCCGAGTGT TTGGCGGACT
GCCGGAACCG CAGCCGTCAA CTTTACCTGC ATGGATTATT ACAAGCGGGT CGCGGTCCAA
CCATTGCTCG CCCGAACCAT CCTTCACCGT ACCACCACAC ACGCCCCCAC CGTGGCGGAC
GAACTGAGTT TGACCCGTCA ACGGCAGTTC TGGTCCAGTC TCATTTCGGG AGGATTGGCC
GGAGGGACGG CCACGACACT CATGTACCCC TTTGAATTCC TGCGCACGAG ACTCGCAATG
GATCTGGGAA AAAACGAATC GCGACAGTAT CAGGGCGCCC TGGACGTTCT CCGCCGTATT
GTGCGATCAG ACGGCGTTGG GGGGCTGTTT CAAGGCTACG GGATTGCCCT GGCGGGAGGC
ATCTTTTATC GCGTCCTCTT CCTCGGCGGT TACGATGCCC TCAAAAACGA ACTCAAACAT
CGAAAACGAG CCGCCATGGT AGTAGGAAAC ACTGGTACGG TACCCGTAGT ACCCGTATCC
GTATCCAACA ACACGCGCAC CCCCACGTTC TCCACCAACG AATTGTCCTG GGGTGAACGA
ATCGGGGCCG CCCAGGCTAT TTCCTTATCG GCCGGGACCT TGAGCTATCC CTTTGATTCG
GTCCGTCGCC GTATGATGAT GCAAGCAGGA CAAGCAATGG AGACGCGGCG GTACCGGTCC
AGTTGGCACT GTATTACCGT AGTCTTGCGC ACGGAAGGAA TTCGTGGCTT TTTCCTCGGT
CTCGGACCCA ACGTTATCCG ATCTGTGGGC GGCGCCGTAC TTCTGGTCGC CTACGACAGT
TTTCGGGATT TGCTATAG
 
Protein sequence
VAGAAAGAFS KTAMAPVERV KLLLQLRHSV YPPPVATAPL ATTTTTPLAS PSAWHVAREV 
YQTQGFRSFW RGNLPSVWRT AGTAAVNFTC MDYYKRVAVQ PLLARTILHR TTTHAPTFWS
SLISGGLAGG TATTLMYPFE FLRTRLAMDL GKNESRQYQG ALDVLRRIVR SDGVGGLFQG
YGIALAGGIF YRVLFLGGYD ALKNELKHRK RAAMVVGNTG TVPAISLSAG TLSYPFDSVR
RRMMMQAGQA METRRYRSSW HCITVVLRTE GIRGFFLGLG PNVIRSVGGA VLLVAYDSFR
DLL