| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_54971 |
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| Symbol | |
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| ID | 7195387 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011688 |
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| Strand | - |
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| Start bp | 214341 |
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| End bp | 216253 |
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| Gene Length | 1913 bp |
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| Protein Length | 526 aa |
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| Translation table | |
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| GC content | 53% |
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| IMG OID | |
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| Product | lipoprotein, type 6 |
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| Protein accession | XP_002183698 |
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| Protein GI | 219126927 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CTTGGCAACG TGCGGGAAGT GTCTCTCGAT TGGCATACAC AGCTGGTGTG TTTGTTTGTT
GGTGCCTCTC TTATTTCCCT TCTCTTCACC ATGTCGGCGG TTGAAGAAAC TCCCGTTGTC
ACGCCGGAGG CTCCGGAAGG CGGCGAAGCG GTCGCTAAGA AAAAGTTCGA GCGCAACAAG
AACGAAAAAC CGATTGAGGA GTTGTACGAT CTCAGTAAAC CCATTCCCAA GGTACGTCGA
GGACTTGCGT ATTTGGGATT GCTCTCTCGT CACCCCGTTT CTTACCCGGC GGACTTGTGC
ATTTGTCCTC CTTTGCAAAC CAACCAATCA ACCACAGGAA GAGCGTCCCG ACAAGGAGGG
CCACGAAAAG GCCGTGCAGG AGCTCACCGA CGCCGTGGAA GCGTTGAAAG AAGAGCGCCG
CAAGATTCAG GAGCGGATCG ACGCGACATT TTCCGATCCC CAGCAAAAGA GCGAAATCCA
GGAACTCCGT ACCGAAATGC AGGCGTTGAA AACACAAAAG GGAGCCCTCA TTGATCAGAA
AAAGGCCCTC CGGGCCCAAC TCGATCAGGC CAAATCGCAA ACCGACAAGC TCATCAAGGA
TAAGAAGGAC ACGCGCAGTC AGGTTAAATT CAATTCCGTG GAAGAAATTG AAGCCGAGAT
TGCCAAACTT ATGCGCCAAC AGGAAACTAC CTCCATGTCC TTGAACGAGG AAAAGAAAAT
CATCAAGGAA ATGGACGCCT TGCGTGCCTC CAAAAAGCAC GTGGCCGCAC TCAAGAGTAA
GGACGGCGCC CTCGACGGTG TTAAGGAAGA ACGCAAGTCC ATCGGACAGC AAATCACCGC
CAAAGACAAG GAGATCGATG AAGTCTCCAA GGACATCGAC CAAGTCATGA CCAAAATTAA
GGCCCTCAAC GAAACGGACT CCACCAAACG GGACGCCGTT CAGGGACTCA TCAAGGAGCG
CGACGAGTAC AAGCTGAAGA TTGGCGAGAA ACTCAAGGAG AAGGATGCCT TGCGTGATGC
CTACCGTTTA CTCAACAACA AGTTTTACAA CTTTCAGCGA GCGATCCGTG CGCAAAAGAA
GATCCAGTAC GAAGAGGAAA AGGAGGCCCG CGACGCCGAA AAGGCGGCCT ACCTCGCCAA
GGTCGAAGAA GAGGAAGCCA AAAAGATTCC CTACGAGGAA GAGCAGGCTC TCTGCGAATT
TCTGGCGAAC TTTTTGGAAC GCACGTACTT GTCCAAGCCC GGTGACGAGG CCAAGACCGC
TAGCGAGAAC AAGGATGTGG TCGCAGTGAA GGATGATCCG TTTGCCGGTC TCAAGCCGGT
CAGCAAAAAG GATGCCGACG AAGAGTATTT TGGCAAAGGC AAGGCCAAGA AGAAGCGCAC
TCGCGCCACC AAAAACCAGG ATACCTCTTC CGGACCCTTC ACCCTCTCGG TTGACACGTT
TGAGCAGTTT GGTTTGTTGA GTTTGAATCC ACCCACTTCG AGTGAACAGG TCGCAAAGTC
GGTCCAGGAA CTCCGCGAGA AGAAGGAGTG GTACAAGCAG CAGCCGCGTG GTAGCGTCCC
GACGGCGGCG GAGATTCGTA AATCGAACGA AAAAGCCGTG GCCAAGCAAC GACAGAGTTC
CGAGGACGGT GACGCCCCGC AAGCCAACAA GAAAGCCCCC CAGGGTGCCT TTTCGCTGTC
GAAGGATGAT TTTGTCCCGC TCGGAGTCGG TGCGGCCGCC ACCTCGATCA ACTCGTCGTG
GGGCCAAAAG CCTGCAGCGT CCCAGGAGGC CTCGTAAAAA TGGCAACCAA AGTCCACCTT
TTATAGTGGT GGTGAACGGA CCCTCTTACA AACAAACGCA CTGAAAGGCT ATTGAGCTGA
TATGTTTTTC TCATCATGAC CGTAGTTTAA TTAAAGAAGA AGTATGATTG CGC
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| Protein sequence | MSAVEETPVV TPEAPEGGEA VAKKKFERNK NEKPIEELYD LSKPIPKEER PDKEGHEKAV
QELTDAVEAL KEERRKIQER IDATFSDPQQ KSEIQELRTE MQALKTQKGA LIDQKKALRA
QLDQAKSQTD KLIKDKKDTR SQVKFNSVEE IEAEIAKLMR QQETTSMSLN EEKKIIKEMD
ALRASKKHVA ALKSKDGALD GVKEERKSIG QQITAKDKEI DEVSKDIDQV MTKIKALNET
DSTKRDAVQG LIKERDEYKL KIGEKLKEKD ALRDAYRLLN NKFYNFQRAI RAQKKIQYEE
EKEARDAEKA AYLAKVEEEE AKKIPYEEEQ ALCEFLANFL ERTYLSKPGD EAKTASENKD
VVAVKDDPFA GLKPVSKKDA DEEYFGKGKA KKKRTRATKN QDTSSGPFTL SVDTFEQFGL
LSLNPPTSSE QVAKSVQELR EKKEWYKQQP RGSVPTAAEI RKSNEKAVAK QRQSSEDGDA
PQANKKAPQG AFSLSKDDFV PLGVGAAATS INSSWGQKPA ASQEAS
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