Gene PHATRDRAFT_51174 details

Gene Information

• Locus tag: PHATRDRAFT_51174
• ID: 7195359
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011688
• Strand: +
• Start bp: 87662
• End bp: 89697
• Gene Length: 2036 bp
• Protein Length: 623 aa
• GC content: 49%
• Product: predicted protein
• Protein accession: XP_002183546
• Protein GI: 219126611

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTACGGAC CGGATGGCAA AAAACTCAGC AACAAAGAGC GCAAACGCCT GCTCAAGGTT 
AAGTTAGCCG AAGAGCGAGA AGCGGCATAC GAAGCATCCG CATCCAAAGC TTCCAAGGAA 
GGGGCTCAAT TTGCTTGTTC ACAAACTGCC GTCAACGAGA AGGACCCGCA ATGGGAAAAC 
TCGCTGGACG TCAATATACC AAATTTTAGT ATCAGTGCGG CCGGAAAAAT CCTCTTCAAG 
GATGCCTCAC TGACAATTGG ACATGGTCGT CGGTACGGAC TGGTTGGTCC CAATGGACGC 
GGAAAATCTA CACTTTTGAA AATGATTCAT TCGCGCGATC TCAAGCTCCC GCCTCGCATT 
GACTTCTTGT ACGTTGAGCA GGAAGTGGTC GCTGACGACA CACCCGCAGT TGAAGCCGTT 
CTTAGAGCTG ATACGGTGCG CTGGAATCTC ATGGAAGAAG AAAAGACTCT GATGCAAGCC 
GTGGATGCTG GTGACGAGTC GGTCGAGAAG ATTGAACGTC TGCAGCAAGT CGTGGACGAG 
TTGACCGCCA TGGGAGCAGA TTCGGCCGAA GCCAAAGCCC GTCGTATCCT GTACGGTCTC 
GGGTTCACTA TGGACATGCA AACAAAGCCG ACCAAGATGT TTAGTGGAGG GTGGCGCATG 
CGTATTTCGC TGGCACGTGC GTTGTTTGTT GAACCGACAC TGCTCATGTT GGACGAACCG 
ACGAATCACT TGGATTTGAA CGCCGTAATC TGGCTCGACG AGTACCTGCA AAGATGGAAA 
AAGACTTTGT TGGTGGTATC CCACGACCAG GATTTCTTAA ACAGCGTTTG TCAGGAAATG 
TTGCATATCG AGGACCTCAA ACTAATTTCT TACAAGGGTA ATTACGACAG TTTTAAAAAG 
GCCGAAGCGA CCAAGTTTCA GCAACACATC AAGGCGTACG AAAAGCAGGA AAAGCGTCTG 
CGGGAATTGA AAAGGTCGGG ACAATCCAAG AACAAGGCAC AGGAAACTGT CAAGAAGAGC 
TCCAAGCGAG AAGCTGGTGC GCGGAGTCAA AAGTTGAAAA ACCAGGCAAT TGCTGCGGGA 
ACGGAAACGG CGGAACTATC GGAGCTCATT CATCGGCCAA AGGAATATCA AGTCAAGTTC 
GAATTTTCTG AGGTGAACGA GCTTACGCGC CCCGTGATTG AAGTGAACAA CGTGCATTTC 
CGTTATTCAC CAAAGCATCC CGTCATCTTT GAAAAGGTCG ACTTTGGAAT TGACATGGAC 
AGCCGAATAA CCATTGTCGG CCCGAATGGT GCCGGCAAAT CAACGTTGCT GAAATTGTTG 
ACGGGAGCGC TGAACGCGAC GGGGGGCGAC GTCCGTCGCA ATGGGCGCTT ACGAATGGGT 
ATTTACGATC AGCATTTTGT CGATCGACTA CCGATGAATA AAACACCAGT GGAACACTTG 
CGAGATCGTT TCGAAGAAGA AACCTACCAA TCGGTACGCA ATCGTCTCGG AAAGTACGGC 
TTGGAGGGAC ACGCACACGA AGTCGTGATG CGCGATTTGA GTGGTGGCCA AAAGGCTCGA 
GTAGTTTTTG TCGAACTGAG TTTGCAGTGC CCGCATGTGC TTCTGTTGGA TGAACCGACA 
AACAATCTCG GTACGTATCG TCAAGGAGAT GTGCCTCGTC GACTTGTGTC TTGTGTGTAC 
TAATAAATGT CAACATTCAT CTGATATTCG ATTCGTTTCA CTTTTTGACT GCAGATATCG 
AATCCATTGA CGCGTTGACC GACGCGATCA ACGCATTCAA CGGAGGAGTA GTCGTAGTTA 
CACACGATCA GCGATTGATT GAAGAATGTG AATGCACCTT GTGGGTTGTC GAAAAGCAAG 
GGGTCACGGA ATGGAAGGCT GGCTTTGACG ATTACAAGGA GAACATTCTG CGTGAGTTGG 
AAGAAGAAGT AGAACGGGAG GCAGTGATTC GGAGACAAAA GATTGACGCT GCGGCTATTG 
CTCGTGCCGA AAAGCTGGCC CGACTGGCAA GCAAAGTCAA AACCACGAAG AAGTAA 

 

Protein sequence

MYGPDGKKLS NKERKRLLKV KLAEEREAAY EASASKASKE GAQFACSQTA VNEKDPQWEN 
SLDVNIPNFS ISAAGKILFK DASLTIGHGR RYGLVGPNGR GKSTLLKMIH SRDLKLPPRI 
DFLYVEQEVV ADDTPAVEAV LRADTVRWNL MEEEKTLMQA VDAGDESVEK IERLQQVVDE 
LTAMGADSAE AKARRILYGL GFTMDMQTKP TKMFSGGWRM RISLARALFV EPTLLMLDEP 
TNHLDLNAVI WLDEYLQRWK KTLLVVSHDQ DFLNSVCQEM LHIEDLKLIS YKGNYDSFKK 
AEATKSGQSK NKAQETVKKS SKREAGARSQ KLKNQAIAAG TETAELSELI HRPKEYQVKF 
EFSEVNELTR PVIEVNNVHF RYSPKHPVIF EKVDFGIDMD SRITIVGPNG AGKSTLLKLL 
TGALNATGGD VRRNGRLRMG IYDQHFVDRL PMNKTPVEHL RDRFEEETYQ SVRNRLGKYG 
LEGHAHEVVM RDLSGGQKAR VVFVELSLQC PHVLLLDEPT NNLDIESIDA LTDAINAFNG 
GVVVVTHDQR LIEECECTLW VVEKQGVTEW KAGFDDYKEN ILRELEEEVE REAVIRRQKI 
DAAAIARAEK LARLASKVKT TKK