Gene PHATRDRAFT_49124 details

Gene Information

• Locus tag: PHATRDRAFT_49124
• ID: 7195205
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011688
• Strand: +
• Start bp: 666054
• End bp: 668440
• Gene Length: 2387 bp
• Protein Length: 414 aa
• GC content: 50%
• Product: predicted protein
• Protein accession: XP_002183651
• Protein GI: 219126829

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.000600409
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CACACATATG CACAGTGTAG CATGTTTCAG ACTCACCAGG TAAACTCTCA TAACGATGCG 
GACGGCAGCA ACAAAACCGT GCCACGAGTG CCATTAGGTC GCCCAGTCTT ACGGCAATGG 
GAGCTCACGG CTGAATCTTC CAAGTACGAA AAGTCCATTG CCGCTCCTTC AGATCACGAT 
CTTGTCCTCA TGTGGACAAT CTGGGGAACG CTTCTGTCGA TACTGAGTCT CATCCTGCTC 
GTCATCTTTC TTGCTGTGTT GTCCTCCAAA AAGGCACGGC GTAATTCCTT CAATCTTTAT 
TTATTGTTCA TGATTGGACC AAACATGTAC TATAGTTCCC AGTGTGCAAT TACCTGCGCC 
TGGAACGCCA TCTTGGGTCA CTATCAGAGC TCCCCCATGT GTTTGTACCA GTCGTGGTAT 
CTCATTTTCG GAAGTGGGGC CAATTCCTGG ATGATTGCCG TAATTGCGTA CGAACTGCAC 
CGCCTATTGC GTTTCTCGCG TCGACGACAG CGTTACTTTC CACCGCGGCG AGCCCGGGTG 
GTCACCGTAT CACTACTTGT GTATGCGTGG GTGGCCTTTC TAGCATTTTG GGGCGTTCTC 
TCCTTCCCGT GGCTACCGCA CGATACCAAC GCTCAGAACG GTGCTTTTTG TATTCCCATC 
GAAACGAACC GCCGCGGGTC CCAAATCACT GGCTGGCTAC TCTTTTTACC GCTGCTTATC 
ATGATCCCTT TTGCGTACAC GCTCGTCGTT ATTGCCGATG TTGTATGGAA CAAGTTGTTG 
CCGCAGAGGG GGGCGGCCCG TGTTCTGGCC GTTTACTTTT TTCGTCTCGC CGGTTTGTAC 
GCGCTTACCT GGGCGCCCAC CTTTGTTGTA TTATATGCAG TGCGCGATCA GGGACCCTGG 
GTGACCTGGG GTTGGGGGAC CATTTCGCAT TTACACGGAC TTTTGGCTGC CTTGGTGGCC 
CTTTGGAAAC CCGACATTGC GCAAGCCTTT CGAAGCTTCG TTAGTTGTCG AGCGGATCAC 
GGTTGCCGTG GTTGTGTCTG TGCCACCGTG AACTCTTCGA CCATGGAGTC TTCCGACGAC 
CAATTGGAGC CTACTAGTAC ACATCATGGT CAAGATGATG AAGACGGTAC GACGTGCAAT 
CTAAGTTCCA TGGGCGATTC TGCTACTTTC TCGATGAAAG CGAGTTCCTC GTCGTCGTTC 
CGACGCTTGT CGCCATTGCC TAGCGTCCTA GCGATTATAG AAGAAGCCGA CGGATTGGAA 
CCTTGATGTT CACATTCACC TTTATCGACA GTGGAGCAGG CCGACCTCTC AAAGAGAACA 
AAGAAGAGTG CTTCACTCCC GTTTAATGAG GGTAATGGTG GCTTGACAAC AAACTTATGA 
CGAGCGTTGC ATTATCCTCA CTGTGGCATG CCTTTCTGAA GCAAACTGCT ATCGATGCTG 
ATAACGAGAA CAACATTGCC GATTGTGATA AATGTCCATA CATCAAAGTG TCCAAGGATG 
ATTGAACCAC AATCGATGAA ATTTGTGCAC AGCAAATGTG CCGGCTCCAG TGAATTTCAA 
GAAGTTTGAG GCGTAGCAGT GTCAAAATGC TTATCTGGTG GTCAAGTGAC ATACAAGCGA 
ATTTCTTTGT AAGAAAGAGG ATGACTTTTA AATTATCGCT TACCATGGCT TGACGTGGAG 
AAGCGAACAA GCGAAAGCCG TCAATAGGAA AAATGCGCTC CTTTGCGGAC GTCACAGCCT 
TCAGCGAGGA GATAATTGTG GAATGACGCC ATCCGAGAGA CAGACTGCGC GAAAAAAATG 
GATCTTGCTC TGCCGGTCCA GACAAATGAC TAGCCGTCTT GGTGGTGAAA AATGTCGTAG 
CTTGTGATTT ACTCTTGACG AAAGCGAGCA TGTGAAGTCC TGCTATTCCT CCTTTGAGAA 
TCCTGGCCTC ACCAGAAAAG CTTGTCATGG CAAGGTTATG GATTTTATGT ATGCCATGAT 
CCGTCGTGTG ATTGCGTCCC TTGCTCGGGA TGAACCTGTG ACACAAAAAC CACTTCTCGG 
AGTGCCACTG TGGTAAAAAG AGAGTCCCAC CCAGAAACGC CCAATCTTGT ACAAAACTGA 
TACAACACCA AGCCGATGTC GTTTGCCAGC ATCTGCGTCT TGAATAGCTC TTAAATATCT 
TTGATTTTGC TCCACTGTTT TTCAGGAAGT TGCCAGCAAG ATGAGAAGAA GCCATGACGA 
GCGCGCTTAC AGAACCCTCA TATTGGCCTG AGGATCAGCT ACGTGAAAAA TTACAAGTCC 
GATGTCCCAT TTTTCGGGGT GGGTCGACAG CAGGCCGCTG TCGCCCGCAC AGGAGGCGTC 
TAGACACAAA TGCGACGAAG TGTTTTTCTT CAGAACATTT GGAGCAG 

 

Protein sequence

MFQTHQVNSH NDADGSNKTV PRVPLGRPVL RQWELTAESS KYEKSIAAPS DHDLVLMWTI 
WGTLLSILSL ILLVIFLAVL SSKKARRNSF NLYLLFMIGP NMYYSSQCAI TCAWNAILGH 
YQSSPMCLYQ SWYLIFGSGA NSWMIAVIAY ELHRLLRFSR RRQRYFPPRR ARVVTVSLLV 
YAWVAFLAFW GVLSFPWLPH DTNAQNGAFC IPIETNRRGS QITGWLLFLP LLIMIPFAYT 
LVVIADVVWN KLLPQRGAAR VLAVYFFRLA GLYALTWAPT FVVLYAVRDQ GPWVTWGWGT 
ISHLHGLLAA LVALWKPDIA QAFRSFVSCR ADHGCRGCVC ATVNSSTMES SDDQLEPTST 
HHGQDDEDGT TCNLSSMGDS ATFSMKASSS SSFRRLSPLP SVLAIIEEAD GLEP