| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_49122 |
|---|
| Symbol | |
|---|
| ID | 7195203 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011688 |
|---|
| Strand | + |
|---|
| Start bp | 659220 |
|---|
| End bp | 662396 |
|---|
| Gene Length | 3177 bp |
|---|
| Protein Length | 1058 aa |
|---|
| Translation table | |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002183649 |
|---|
| Protein GI | 219126825 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0406753 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAACGG TCAAGCCGAG CGAAATGAAA AGGCGCGAAG CCGAAAAGAA GCACGTGTAC
TCGGCATCCG GAGCACCGCT GGGTACGATT TCTTCCCCCC CACGCACGAC CGTCTCCACG
CCGCCCTTGG GATTGAAAAC GACCATTGTC TTCTCCGGTA CCGGTGTCCC GATCGATACG
CGTCTCGAAT CACCCCCCGA GCTACCACCG GCCAAAACTG GGACGAGTCC CAACACGCGA
CCCCCGTTGC CACGCAAAAG ATCCAAACGG AGTCAGCGGA GTAAAGGCAA AAGCCGAGAC
AAGAATACTT CCTCCACACC CACGATTTTG TGTTGGCTGA TTCAGCGAGG CAAGTATGAG
GATGCTACGG AACGCTTGCA CGAAACTCCG CAGGAGGCTA GTATTTGGTG GGTGGAACGA
CCTCCGGGAG ACGATGCCGC TGTTTCCCGG GCCTTGCCCA TTCATTTGGC GTGTCGGAAA
CTCGCGGAAG AAACGGACGA AGCGGCTCGG GCTCGCCTCG GCGACTTTCT TTCCCACCTT
CTTTTGATTT ATCCACAAGG GGCAAGAATG CGTGACGACG GACACGTCGA CCGGACTCGG
ATCGAGGACA GCCTACTGTT TTGCAACAGT AGTAACAACA GCAACAATAA CAGCATTCGA
TCCGCCCGAC GTACAGCGAT TCCCGTCACG GGTCGATTGC CCGTGCACGA TGCCGTGGCG
GGGGGTGTCG ACGAAGAAAC ACTCGCCTTA TTCCTCACTG TATATCCGGA ATCGATCTAT
TCCGTAGATG AGCGACGATT GTCTCTGTCG GAACTCAATC GACTCGCCAC AAACGATCCG
AATATTCAAG GTGTTCTGGA TTTAGGCTAC GAAGACTGGA AGTCGGCCTA CGAATCGTCT
CCGCTATCTG GAAGGTCCGC CTCAAAAATG GATGATTTGG TAAGTTGCGC TTCCGAGGCT
CGGAACGCGG ATATCAGCGC GTCAACGCCG ATTTGCCTAT TAGTCGACGA AGGCGACGAA
CTCTTTCCGG ATAATGTCAG TGCCTTAACC ACACCTGACG AGCTTTTACC TTCCGGTAAC
AATGTGTGGG GGATAGACCG ACATGGCGAC AAGATTGAGG ACAAAGACAA AGAGGAAGTC
TCTTCCGAAC ACGACGTTGT CGAAGAGGCA AAGCACGAAA CTAAACCAGA ACAGAACTCG
CCGAGCTCCG ACCCGGCTCC TATTGTGACC TGGGAACAGA TTGAGGAACG CGCCCTCGCT
TTGGAACGAG TACTTGGCGA GATGAAGACC AAAAATTACG ACTTGCACGA GAAGATTCAA
GTTTTATCCA AAGACCAAGG GAGGGAGATC ATTTTGCGCG TAGATCGATC TCAGAAAACC
GATTTGTACG GAATGGTGGA TGTGTTACAA CACCAGAATT TCGCTCTTGA TCAAAATATT
TATAAAACGG AAACATTGCT TCACTACTCA GTTTTTCCGA GCGACGAAGA GTCGGTGGGA
CGGCAACGGC GACGAGGAGA AATCGCACGT ATGCTAGGCT GGCTGGATGT TGAAGAAAAT
GATAAAAGCA GCACTATCGA GGACAGCAGC GACGAGGAAA AGGTTAATGA CACCACGTTG
CAACAAATAT ACAATGAGCT CCACGAATCT TATGATCAGC AAAAAGCTGC CATCAAACAG
TTTGGTTTCG TCTTTGAAAA ACTCGGGATC AATCGTTTTG TGGACGAGGA CAATGCATCT
GCTGATACGG TGCCCCGGAG TGTCGTTTCC AATCTGACCG TGAACTCCGA CGACTGGAGC
TTTGGCTCCG ATCATTGTGA CGATGTCTCG CGTCCAGAGC GGTCTCGGAA TGTCTTGCGC
GAAGTAGAGA TTGAATGGCC TGAAGACAGC GTAGATGCAT GCCAAGTGAG TGACAATTTA
AGTACCATTT TCCGCCACGC TGCCGCCATC ACCGAAGAGA ATGAAGATTG CCTGATGCCA
ACATCCTCTG GGGGGCACAA TTTTGGAGTA GATAATCTAA GCCAAATCCT ACGGTCGGCA
GCTGCCAAGG AAACGAGGCG GAAAAAGGTC AAGCGTATGA AACCTGTCAG TCAAGAATTG
ACCATTCCGG CGCTCATGCC TGAAGGTGGT GCAAAGATGT TACCAGCAAT AGCGGGCAGC
CTGCAACACA CCAAGTCTAT TGGCTCTTTT CGATCGGCAT CCAAATCCTC CTTGAAACAG
AGCTTTTTTA CATCAACTAC CAAGATTTAC GAGGTGCCTT CTGTCTTGCC GGAGGCTCCT
GTTAAAAGTC CATCGTTAAA GTCTACGATT TCGGCCGAAC GCTCCTGTCA TGTAGCGTCG
GCGTGTATAT CAGACCCAAT CCGGCCTCGT AGCATCAAGT CCAGCGAGGA TCCGAAAAGA
AGTGACAGTG AAAGTAAAGG TAGCGGTGGT GGATTCCGGC GGCAACAGCG GCGCCCGAGC
TTGATGGATG GTGTGACGGC CTTGGCCGAA AAGGGGCGAC TCCATACACG CGAGCACAAT
GATCAACAAT CTCAATCTCC TTCGCATTTG CAGTCCGACG TTACAGATCT CCTGACTCCC
GATGGTGACA AAAACGGCAC GGACAATGAC CATTGTGAGC ACGACGAATT GAAGCTGTCC
GACAGAAAAC CTCCTATTGT GTCGTTTAAC ACTGTCTCTA TACGAGTGTA CGATCGTATT
CTCAGCGATA ACCCGGCAGC TGCTAGCGGC CCGAGTCTTG GTATTGGGTG GGTCTTTGTA
CCTCAAGATG TCAAATCAGT TGACGACTTT GAGATTTTGC GTGAGCCTAT GCGCGCTCCG
GAGAGGTTGC TGCTGACTCG CCAAGAGCGT GAACAGGTCT TTTTTGACCT GGGGTATACC
CAGAAGGACG TGGCTGTTAA CGTACGCGAG CTCAACAAAT TGCGATCACA GCGTCGAAGA
ACGATTGTGA ACCTTGGTTC CACAAGAGTT GAAGAAACGG TGGAAGTCGC CAAGCGGAAA
CTCAAATCAA TCTTGCGACT GAAACGTAGT AGTCCTCTGG AAACATCCGC TAAGAATTTG
CTTTCATCTA CTTCCACAAA TTCGACTACA TCGTCCTCGA AAGACAAGGA AAAGCTCACA
AGTGCCATCG AACAGAGTAC GAGCAAGCCT TTGCAGCTAG CAATCAACCC AATTTAA
|
|---|
| Protein sequence | METVKPSEMK RREAEKKHVY SASGAPLGTI SSPPRTTVST PPLGLKTTIV FSGTGVPIDT
RLESPPELPP AKTGTSPNTR PPLPRKRSKR SQRSKGKSRD KNTSSTPTIL CWLIQRGKYE
DATERLHETP QEASIWWVER PPGDDAAVSR ALPIHLACRK LAEETDEAAR ARLGDFLSHL
LLIYPQGARM RDDGHVDRTR IEDSLLFCNS SNNSNNNSIR SARRTAIPVT GRLPVHDAVA
GGVDEETLAL FLTVYPESIY SVDERRLSLS ELNRLATNDP NIQGVLDLGY EDWKSAYESS
PLSGRSASKM DDLVSCASEA RNADISASTP ICLLVDEGDE LFPDNVSALT TPDELLPSGN
NVWGIDRHGD KIEDKDKEEV SSEHDVVEEA KHETKPEQNS PSSDPAPIVT WEQIEERALA
LERVLGEMKT KNYDLHEKIQ VLSKDQGREI ILRVDRSQKT DLYGMVDVLQ HQNFALDQNI
YKTETLLHYS VFPSDEESVG RQRRRGEIAR MLGWLDVEEN DKSSTIEDSS DEEKVNDTTL
QQIYNELHES YDQQKAAIKQ FGFVFEKLGI NRFVDEDNAS ADTVPRSVVS NLTVNSDDWS
FGSDHCDDVS RPERSRNVLR EVEIEWPEDS VDACQVSDNL STIFRHAAAI TEENEDCLMP
TSSGGHNFGV DNLSQILRSA AAKETRRKKV KRMKPVSQEL TIPALMPEGG AKMLPAIAGS
LQHTKSIGSF RSASKSSLKQ SFFTSTTKIY EVPSVLPEAP VKSPSLKSTI SAERSCHVAS
ACISDPIRPR SIKSSEDPKR SDSESKGSGG GFRRQQRRPS LMDGVTALAE KGRLHTREHN
DQQSQSPSHL QSDVTDLLTP DGDKNGTDND HCEHDELKLS DRKPPIVSFN TVSIRVYDRI
LSDNPAAASG PSLGIGWVFV PQDVKSVDDF EILREPMRAP ERLLLTRQER EQVFFDLGYT
QKDVAVNVRE LNKLRSQRRR TIVNLGSTRV EETVEVAKRK LKSILRLKRS SPLETSAKNL
LSSTSTNSTT SSSKDKEKLT SAIEQSTSKP LQLAINPI
|
|---|
| |