| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_49112 |
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| Symbol | |
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| ID | 7195335 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011688 |
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| Strand | + |
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| Start bp | 620918 |
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| End bp | 622614 |
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| Gene Length | 1697 bp |
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| Protein Length | 494 aa |
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| Translation table | |
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| GC content | 56% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002183642 |
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| Protein GI | 219126810 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00796178 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CTTGCGTTTG CTGAACCGAG AAAAAAGAAC ATCATAAGTC AACATGTCGA CTGCCACGCC
GCATTGCCAC GCCTCGACGG TCGAACAGGA TGGCCTCGTC TACCAGACAG GTTTGGGGAA
TCAGTTCGAA AGCGAGTGCA TTCCTGGCGC GCTGCCCCGC GGTCGCAACA ACCCGCGCAT
GGTTCCGTTT GGATTGTACA CGGAACAGCT TTCGGGAACG GCCTTTACGG CACCGAGAGC
GGAAAACCGC CGGGTTTGGT TGTACCGGAT TCAGCCCAGT GTCACTATTG GTGCCGCCGA
ATCGCTCCCC CAGGAACCGC AATTTGCGGG TGGTTGTGAT CCGCGGGCCT GTGAAGCCGC
GATAGATCCC TTGCGGTGGC ACCCCTATCC CGTCGATGGT GCGGCTGGTG TAGAGTACGA
CTTTGTGTCG GGTTTGAAAC TGCAGTGTCA CGCGGGAGAT CCAGCCATGC GAGAAGGACT
CGCGATATAC CTTTACAGCT TCGGCACCAA TATGAAAGAC CTACAGACGC ATTTCGTCGA
TCACGATGGC GAGCTGTTGA TAATGCCGCA GCAGGGGTCG TTGGACGTTT TGACGGAGTT
AGGACGCTTG ATCGTACATC CCACCGAACT CGTGGTGATT CCTCGCGGCG TTGTGTTTCA
AGTCAATCAT TTCGAGGGCG AGAGCAAGGG CCCCATCCCA GGCACATCTC CGACGGCAAC
AGCACGAGGC TACATGCTGG AAGTATACAA AGGCGGATTT GCCTTGCCGG AGCTGGGACC
GATTGGATCG AACGGGCTCG CCAATGCTCG AGACTTTTTA CACCCAGTAG CCTGGTGCGT
TGCGCAAAGC GACTACGAGA AACCGTGCTG TATTGTGGCC AAAATGCAGT CCCAACTCTA
CGCCAAATCG TCCACACATT CGCCCTATAA CGTGGTGGCC TGGCACGGCA ACTATAGTCC
GTACAAATAC AATTTGGAAC GCTTCTGTGC CGTCAATTCC GTCACGTACG ATCACCTGGA
TCCCAGTATC TACACCGTTT TATCCTGCCA ATCCGAACAC GTGGGAACGG CCTTGGCCGA
CGTTGTACTG TTCCCACCTC GCGTTTTGGC GACCGATGCC AACACACTGC GACCACCCTG
GTTTCACCGC AACGTCATGT CGGAGTACAT GGGACTGCTG TACGGTTCGT ACGACGCCAA
AGTGTCGTCG GGTACGGACG GTGCTGGTGG TTTTGTCCCG GGCGGTTCCA GTTTGCACAA
CGCCATGGTC CCGCACGGCC CGGATGCGGC GACCTACGTC CGCGCCGTGG CGGATCCCTG
TGACGCTCCC GTTTTGCTTA ATCGCGGTTT GGCGTTCATG TTTGAAACGT ATCTGCCACT
CCGGGTCAAT CCACAAGCCT TGCGGGACGA AGCGTGGCGA GATGTTGACT ACACCGCGTG
TTGGCAAGAT TTGACGGCGG CAGATTTTAC CGGATGGGAC TGGGTCAACG GTACGGTGGG
GACGACACGG GAGGAAGACG ATCGGTAGCG AAGGGTCGAG ACGGCGTATC ACGCTGTCAA
TGGAGGAGTA TGCGTGGGTT CTCATTTCCA CCGGCACGGA ACGAAAGACT ACCGTTTTGA
ATGCGGCTTA CGAGTGCTCA CAGTCTGTGA ACGAACATTA ATTTCGCATA CATATAAAAA
TCGACGTTAC CTTGTGC
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| Protein sequence | MSTATPHCHA STVEQDGLVY QTGLGNQFES ECIPGALPRG RNNPRMVPFG LYTEQLSGTA
FTAPRAENRR VWLYRIQPSV TIGAAESLPQ EPQFAGGCDP RACEAAIDPL RWHPYPVDGA
AGVEYDFVSG LKLQCHAGDP AMREGLAIYL YSFGTNMKDL QTHFVDHDGE LLIMPQQGSL
DVLTELGRLI VHPTELVVIP RGVVFQVNHF EGESKGPIPG TSPTATARGY MLEVYKGGFA
LPELGPIGSN GLANARDFLH PVAWCVAQSD YEKPCCIVAK MQSQLYAKSS THSPYNVVAW
HGNYSPYKYN LERFCAVNSV TYDHLDPSIY TVLSCQSEHV GTALADVVLF PPRVLATDAN
TLRPPWFHRN VMSEYMGLLY GSYDAKVSSG TDGAGGFVPG GSSLHNAMVP HGPDAATYVR
AVADPCDAPV LLNRGLAFMF ETYLPLRVNP QALRDEAWRD VDYTACWQDL TAADFTGWDW
VNGTVGTTRE EDDR
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