| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_49107 |
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| Symbol | |
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| ID | 7195456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011688 |
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| Strand | - |
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| Start bp | 613816 |
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| End bp | 615477 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | |
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| GC content | 51% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002183778 |
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| Protein GI | 219127094 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.522307 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTCGTT GGAAGATCCC TGTACGCTCA GCGATACCGT TGCCCTTGCT GAGTCCGGTG
GTAGTCTTTT ACCTCCACAC ATCCGTGACA TTATTCACCG GCCTGAAGGA GGTATCTATG
GAGAAAGAAA TACGATTCGG GATGCCGCTA CTGGCCAAAA TTTCCACTAA CGTTACGGCA
GAATGCCAAA AGAAAATGTT TTCCGTTGCG GCAGAACCAG GAGCGCCATG GCATCGACCA
GAAATCTCGA GTATATCATT TCAACAACGG TCTTCTGCAA GGCTTAAAAG GGTTTCGAAC
CCAATTACAA AAATTGCTAC CGTCTCCTGG AAAGATGCTG ACTTGATCCT TGGCGATCTT
TCTCCCAAAG GTCGTTCCCA ACGGTTCCCG TCCGTCCAGG AACGGGTCCG TTTTTATATG
GCGAGCTGGT ACACTCCTAG CTGTTCCGAA AACGAGGACG ATTGGGTGCA CTATCGTCGA
GTTTTTCATC GAGCTTCGAC TGTGGTTGAG ACGGGCTTGA ACGCTACAAG CGTCCTGGAA
ATCGAAGGGC CAATATCCAA GCCGACAGCG AAAGAATCCA TACATTTCCT CGCAAACAAA
AAGTACCCCC ATACCATTCG CATGGTGGTG GATGATATCA TCCGTGGAGG CACAATTTTT
AGCCCAAGTG AGGCAAATTT ATATGCATGT GCCCAGTCTC ATCCCAAACC GAGCCTTCGG
AACATGTATT GCCCAGAACT TTTGGAGACT TTAGTACCGC TACACAGAAG GTACCAGGGG
CGAAACGAAA CAAGCGTTCC GCTGCTGGTT CAAGTCGGAG ACGTGCTACC TTCGAAACAG
CCGTACGATG GTGGCGACGA CAAATTTGTC TCCATTCCAC ATTTCAAAAA GTTTCGTTTA
GTCGCTAATC AATCGTGGGG CCATCTTTTG TCCGGGACGC TTCCGCCGTG TCAATCGGGA
CCCCGATCAA TGCACGCGCA TGGCTTGCCT CCAATTTTGT TCAAATTGGC TGCTGATCGA
CACTATCGTG GTCTAGAAAC GCTAGCTCAG TACGATAGAC CATGGAGTGA GAAACGGAAT
GCGGCCGTCT TTCGTGGAGC ACTGACGGGT CCTCAGCTTC CCGCTGGGCT TTCGGAATTG
CAAAAATGCC AGCGAATGCC TAGATGCCGT ATGGTCTTGG CGTACGTAAA TTCTACCCTG
GTGAATGCCA AATTGACCGC TTTTCCGCAC CATCGCCTTC CAAGTCTGAC GGTGGACAGC
GCGACCACTA TTGGCGGGTC CGAATTTGGT TATGCCAAAA TGCTATCGTA CAAGGCTATC
ATAATGGTGG AGGGCAACGA TGTGGCGTCG GGATTAAAAT GGGCATTGCT GTCCAACTCA
GTGGTACTCA TGCCAAGGCC TACGGTCACA AGCTGGGCAA TGGAGGAATT GCTGCAGCCT
TACATACATT TTGTTCCGCT GGCGTCGGAC CTGGACGATG TGGAAACGCA GATGCAGTGG
GTGCTGGATC ACGACGAGGA ATCCCGTATG ATAGCACGAA GGGGTTCTTT ATGGATCACG
GACTTGCTGC TTCACGCAGA CGCCAACGCT GACAACGCTC AAATCGATGA CGAGATGATG
CAGCGTTACA TCGGACTATT TCGGCCTTGG AGAAACGGCT GA
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| Protein sequence | MFRWKIPVRS AIPLPLLSPV VVFYLHTSVT LFTGLKEVSM EKEIRFGMPL LAKISTNVTA
ECQKKMFSVA AEPGAPWHRP EISSISFQQR SSARLKRVSN PITKIATVSW KDADLILGDL
SPKGRSQRFP SVQERVRFYM ASWYTPSCSE NEDDWVHYRR VFHRASTVVE TGLNATSVLE
IEGPISKPTA KESIHFLANK KYPHTIRMVV DDIIRGGTIF SPSEANLYAC AQSHPKPSLR
NMYCPELLET LVPLHRRYQG RNETSVPLLV QVGDVLPSKQ PYDGGDDKFV SIPHFKKFRL
VANQSWGHLL SGTLPPCQSG PRSMHAHGLP PILFKLAADR HYRGLETLAQ YDRPWSEKRN
AAVFRGALTG PQLPAGLSEL QKCQRMPRCR MVLAYVNSTL VNAKLTAFPH HRLPSLTVDS
ATTIGGSEFG YAKMLSYKAI IMVEGNDVAS GLKWALLSNS VVLMPRPTVT SWAMEELLQP
YIHFVPLASD LDDVETQMQW VLDHDEESRM IARRGSLWIT DLLLHADANA DNAQIDDEMM
QRYIGLFRPW RNG
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