| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_49066 |
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| Symbol | |
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| ID | 7195429 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011688 |
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| Strand | + |
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| Start bp | 479828 |
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| End bp | 483159 |
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| Gene Length | 3332 bp |
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| Protein Length | 1012 aa |
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| Translation table | |
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| GC content | 55% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002183615 |
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| Protein GI | 219126754 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GCGTATCTGT TTACTCGGTT CGTTCGCACC CCCACTCACA GTCAACCTCG GGTCTTCCTT
TCCTACCTTG CCGTGTCTGG ATCGCTGGAA TACGTGACCA TCACAGTCAT TCTCTGCTGT
TCGCTCACTC TGCTGTTCAC TGTCCGCTGG ATCGATCGAC AACACAGCAT TGCGGTAGGT
ACACGCGTAG GCTGCATCGG TGTTCCTCGA CGGCTACCAA CAGTCTCCCA CGTTCCTTTC
CTTACAATCA ATCAATCAAT CAGCCGCCTT GGTAGTTCGT ACACATACAT ACAGCATGGG
CAATATGGTT TCCAACGAAA GAGGAGCTAC GGGCACCGGT ACCAGTACAG CCATCCCCAC
CCGGACCAAC CAGAAAAAAG CCTCGGCACA AGCCGTTCAA CCACCTCCCT TGTGGAACGA
ATCCTCCAAC AAACAGTCCT TCCACCTCGA TTCACCCGGC TCGGACTTGT CCAATCCTTC
GCAGTTCCGA CACCGCCACC GTCACACCGT CAGCAACAGC AATATTCATG GTCAAGCGCA
AACACCGCTT CGACTGCGGC GTCGGGCCTC CAAGGTTGTC AGCAAGTCAC ACATCGCCAC
CATGGAATCC TCGCTTCCGT ACGGTGATTA CTCCAAACGG ACCAGTTTGC CCCCGCCTTC
CCAGTTTTAT TTTGGCGCTG GCTTTGGCAA CGTCGATAAC GCCAGCGCCA GCTTTCTCGA
GGATCGCGAC GAGCAAGACT TGCTGGACCC AAGCGCTCCC GAAATGGCCG TCTTCCGCCG
ATTCCGGTTG GCGGCCAACA CTGCCGGGGT GGGACGAATG GAAGAGGACG CCGCTAGGCG
TCGGGAACAG ATTCTGACCT CGCGCCAGCA ACGCAAAATT TGGTTCAAAT CGCGTCGCAA
GGCTTTGCAG CAGAAGGCTC GTCGTGCCAA AACTATGCTT TCCGCTTGTT GGGAAGAGCG
ACGGGGTATG TGCATCGTCA TTCCCGACGT GCAGCACCCG CAAGATGGGC GTCCCGAGGC
GGCATCCTAC CCACCACACG TTGCGGTAGA CTCCATCACC ACGGACCCAC TACGCCGGGT
TTCGTCTACC TCTCGTCGCG TTTCCGAGGA ACCCCCCATC GTCGACGGTA CTGGTCCGAT
GCAGTTTGAT CCGCCGCAAG TCCGCGTGCT GGATGAGAAT CAGCAGTCTC GCAACTTTGA
TTCGTTTTAC GACGAACTGA CCGTCACGGC GGCGCCTTTT GCGCCCGTGT GGAAGGAGAC
AAAGCAGCCC AAACACGACG AACACTCACG GGTACCCGTC GCTGCCGAGG TTCCATTTTA
TTTGTACGAT CCCCAACGTA TTTTGGAAGG AATCGTCGAC TCCTCCGAGT CTCCGACGAC
CGCCACAACG TCGACGAAGC TCCAGCAATC GCGCCGTCGT ACAAGTGCGA GGTACGTGGA
TCGTTCGGCG TCCCCCGTGG TCGCACTCTT TTCCGACGAC GACGAAGACC AGTACGATCG
CATCGGTGAT GATGACTACA CCACCAAGAG CATCGAGACC AGTGACAAAT ACAAGACCGA
GAAAGACGAC GATAATGACA CCAACAAGAC TCCATCTTCA TCCAAAACCC TGTCAAATCG
GTCGTCACCC TTTGACGAAG ACTCGGTATC GCAAGAACCA GCGGAAACGC CCAACGACGA
AAACGCTTCC GTTGTGACTC CGTCGACGGT CCAGGACCAG CCGATAGCGG TGCGTCGATC
CTCTACACAG TCTTGTTTGG ACCGTGAAAG CATTGAAGCC AACGTCCAGC AACAAATAGA
CCAGCAACAG AAGGGCGTCG CCGTCACGCA GAAACACCAA ACGCGACACC GCCCGAGTCT
TGCAGAACGG GCCGAGGATC TGGGAAGTTA CGGCAGTGAT CCACCCCAAA CCAAGGCCCG
AGCCGTGACG CAGGCGACAA AAAAGGGAGA TGCTCCTCTA GATCAAGCCA CAACCCGAGT
AACCGCTCCG GAGTCCCGCA AGCCCGTGGT GGGGCATACC AGTACCGCCA GCATTCGAGT
GGCCCGCACG TCGGAATCAA CGGAACCGAT CCAAACAGCG CACGCCGTTG CAGCCAAGAA
ATCAGGCAAG GTCGAGTCAG TCCAACCGAA GCCAGCCAAG ACAGTTCAAC CGCAAGAATC
CCGTCAATCG TCTTCTTCCC AGAACTTGCC CATATTGCTC CAGCTGGCGG GGTGGAGAGC
ACCCAGCGCG ACAACCAACA AAGGGCAACG GAACAGCAAC GGCTCAAATG CATCTACTTC
GACTGCAGCA GGTGTTGCCA AACAGCCCAA CAACATTCCC ATCTTGTTGC AGCTTGCTGG
TTGGAAGACC GAAAATACAA AGGATAAACA GGGCATCCAG AGACTAACTC TTACGGAAAA
GCAGCTCTCC CAAGGGCCCC CGGGCCGACG TAGTAACGTC ATGGCGACGC GAACGGTTGC
ACCGACTCGG CGTCGTCAGA GTGCGCCACC ACTGTCGGCC GTTCCGAAAG ACGGCAATCG
GGCTTCCAAT CGAGAATCGA GCGCCTCTGA ACCAATCTTC CGGAAAGGAA CAACATCCCA
AATCCAAAAG GAGAATCAGG GTAAGAACAT TGCCACCATA CTGCAGCAAA CGTATCCAAT
TGCGACGGCC TTCTCTATGG ATGCGATCCA TGACCTTCAA CCGGCACAGG TGCGTTTTGA
TCCGAATCAC ATTAAGAAAA CTGCCAAGGC GGGATCGCGC CCGCTCTCCA CGGCTGTAGG
AGTTGTTTCA GTGAATGGAT CAAACGAGAT TAGTACGGGG CTGAAAAGTC CGGCGGCCTC
TTCAACGTGC ACTACGGAAA CACCTCTGAG TCAAGGATCT ATTCCCATAC TGTCAGAGGA
GGCTATGGGT AACGCGGCCT TCTTGTTCTC TCCCAGTTAT ATGGGGAATG ACAAGGCATC
CTCAGAGCAA ATGAGATTGG CACCACCAGC GGGAGTTATG CACCGTGATC ACGCTTCTTC
CTTTGCCTTG TCAACCTTCG ATTCCCGCTG TCGTGTTTCT GGATCTTCCC TCTCGACCAA
ACCAGTCGCG ATTCGTCCCC TTCACAATGT TGTCGACGAC AGTGGCAGCA ACCGTAGCTA
TCATACCAAC AGCAAGACTG TTTGGAGCAT TGATGAGGCT CCCAAGGAGG GCAGTGACGT
CGGTAAACGC AATAGCAGTA TAACAACGTA TGACGATACC ATGCGAGGAA AGTTTGCGAG
CAAGGAATCA CAAAAGTTTG AAATGCCACC AATTGTTCAT GCACTCTCGG ATCTCACTGA
TACGACTGGA CGGGAGAGTG GAATGGGCAC AA
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| Protein sequence | MGNMVSNERG ATGTGTSTAI PTRTNQKKAS AQAVQPPPLW NESSNKQSFH LDSPGSDLSN
PSQFRHRHRH TVSNSNIHGQ AQTPLRLRRR ASKVVSKSHI ATMESSLPYG DYSKRTSLPP
PSQFYFGAGF GNVDNASASF LEDRDEQDLL DPSAPEMAVF RRFRLAANTA GVGRMEEDAA
RRREQILTSR QQRKIWFKSR RKALQQKARR AKTMLSACWE ERRGMCIVIP DVQHPQDGRP
EAASYPPHVA VDSITTDPLR RVSSTSRRVS EEPPIVDGTG PMQFDPPQVR VLDENQQSRN
FDSFYDELTV TAAPFAPVWK ETKQPKHDEH SRVPVAAEVP FYLYDPQRIL EGIVDSSESP
TTATTSTKLQ QSRRRTSARY VDRSASPVVA LFSDDDEDQY DRIGDDDYTT KSIETSDKYK
TEKDDDNDTN KTPSSSKTLS NRSSPFDEDS VSQEPAETPN DENASVVTPS TVQDQPIAVR
RSSTQSCLDR ESIEANVQQQ IDQQQKGVAV TQKHQTRHRP SLAERAEDLG SYGSDPPQTK
ARAVTQATKK GDAPLDQATT RVTAPESRKP VVGHTSTASI RVARTSESTE PIQTAHAVAA
KKSGKVESVQ PKPAKTVQPQ ESRQSSSSQN LPILLQLAGW RAPSATTNKG QRNSNGSNAS
TSTAAGVAKQ PNNIPILLQL AGWKTENTKD KQGIQRLTLT EKQLSQGPPG RRSNVMATRT
VAPTRRRQSA PPLSAVPKDG NRASNRESSA SEPIFRKGTT SQIQKENQGK NIATILQQTY
PIATAFSMDA IHDLQPAQVR FDPNHIKKTA KAGSRPLSTA VGVVSVNGSN EISTGLKSPA
ASSTCTTETP LSQGSIPILS EEAMGNAAFL FSPSYMGNDK ASSEQMRLAP PAGVMHRDHA
SSFALSTFDS RCRVSGSSLS TKPVAIRPLH NVVDDSGSNR SYHTNSKTVW SIDEAPKEGS
DVGKRNSSIT TYDDTMRGKF ASKESQKFEM PPIVHALSDL TDTTGRESGM GT
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