Gene PHATRDRAFT_49064 details

Gene Information

• Locus tag: PHATRDRAFT_49064
• ID: 7195309
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011688
• Strand: -
• Start bp: 462412
• End bp: 467034
• Gene Length: 4623 bp
• Protein Length: 779 aa
• GC content: 51%
• Product: predicted protein
• Protein accession: XP_002183756
• Protein GI: 219127048

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ACGGGGAGTC AAATACTCAA AACAATCACA GAACTTGAGA GTGTGTGCGT GTGTGTGCCA 
TACAAATCCC ATAAAATCCG CAACGGGCAG GATTTCGGTA CACACAAACA CAAATCCACA 
TCCATCGACA ACCACACACC ATGAACTTGT TTCGTACGAT TGCCCTCCTT GGGTTGGCAT 
CTCCCACAGT GTTGGCCTTT GACTACCAGA TCACCGGCAG CGAGAGCATC GTCCTCACGG 
ACGTCGAAAC CGGCATTGAC AAGATTGCCA CCATCTTTAC CGACGAACAG ATTCTCGTGT 
CGGTCGATGG ACTCACCTGG GAACCGTCCA CCACCAACGT CACCGAATCC AATAACCTCC 
TCGTTTGGGA AACCTTTCTG GACGGACAGT TGCAGCCCCA GGCCAGCGGT ACTCAGTCCT 
TGGCCGATAC CGGACGCATC CTCCCCACCC GAATCGACGC CGGAGAAATC GTCGTGGGCA 
GTGGGGGTCG GGTCAATATT CGTGTCGAAA TTACCGTCGA CGGTAACACC ATCACGACCG 
AAAAAGAGTT TGAAGCGTAC GGGTCCGGAG TGTCCATTAT TCCTCTGCTC GTGGTCCTCG 
TGTTTGCGCT TTCGACCCGT ATGGTACGTA CGATCCTGTG TGGGATTTCC GTTTGGCCAA 
CAAGCCATTT GAGTCTCGCT CTACGAACCG TTCTCCTTCC TCACCGTCAT TTTGGCTTTG 
TACGCGGTTT CTAGGTGGAA TTTTCCCTCT TTTCGGGCAT CTTTATCGGA GCCTGCATGA 
TTAGCGGCAA TCTCAAGGAC GGGTTCAAGT CCACGTTGGA AGACTACATC CTCGAGGCTC 
TGGCCGATGT GGATCACGGA TACGTTTACC TTTTCACGCT CTTTCTCTCG TAAGTTTGAA 
GTCACTGGAA CAAGATTTTC ATTCATTGCT CTCGCACTCG CACCAGTGAA CAAGAAATAA 
ATACGCGACC AATGCTGTGT GTTCTCACCC CACAAACTTT GTTGTCTAGT GGCTTGGTCG 
GAATGTTGGA AAAGAGCGGA GGCATGTACG GTTTCACCAA GGATGTTTCG CGATTCGCGA 
CCACTCCCCG GACGGGTCAA CTCGCCTGTT TCTCGGTCGG CATTTTTGTG TTCTTTGACG 
ACTACGCCAA CGTCCTACTC GCCGGAGAAA CCATGCGTCC TCTTCTCGAC CTACTCTACG 
TTTCGCGCGA AAAGCTCTCC TTCATCGTCG ACGCCACGTC CGCTCCCATT GCCAGTCTTT 
CGCCAGTCTC CAGTTGGGTC GGATTCGAAG TGGGACTCAT CCAAACGCAG CTCGATATCA 
TCGTGGAACG AGCCGGAACC GACGATATTG GTATCAAGAC CTCCGGTTTG GGAGTGTTCT 
TGCAAAGCAT CAAGTACCGC TACTACCCGA TTTTTATGAT TGTTCTGATG TTGGGATTGA 
TCTACAGTGG CCGTGATTTT GGTCCGATGC TCGTTGCGGA ACGCAAAACT CAAGTCTACG 
AACGCTCCGA TGGCGGTGAC GGCAAGGGAG TCGCCAGCAA AAACGGAACC TCGGAGAAGC 
ACAACGCCCC CAAGGAAGGA ACGCCTTTGA AATCCTGGAA TATGGTGTTC CCCGTACTGG 
TTTTGGTAAG TCGCTTCAAA GGCAAACGGA GCGTCGTCAG TTTGTACCAC GCGCATTGTA 
TCACTCACGA ACTCGTCGAC AGATTTTTTT CATTTTTTAC ATGCTCGTCA AAACGGGTGA 
GGAACCGGGG ACCAGCCAAA GCTTCATGGA CAAGATTGAA AACTCCAACT CGTATTCGGC 
CCTGCTTTGG GGTACCATGG CAGCCGTGAT GCTGACCACC ATCTTCTACT TGCTACAGCC 
AGTCAAGGAT GGAAAAGTTC TCGTTCCCGT TCCAAGTGTG GTGAAGGAGC TATTCTTTTC 
GCGCAAAGAA AAAGACGAAG ACGCCGAATC GCCGCCTCGT TTCCTCATGA CGGTTCACGA 
TAGTGTCGAG AGCTTCCTCT ACGGAATGGG CCGCATCTTT CCGGCCCTCA TCGTTCTGAC 
ACTTGCTTGG GCGTCTGGTG CTATTATGAT TGGCGTCGGC GCCGACCGCT TGTTCTCACG 
CTGGATTGTC GGCGGTATTG ACCCTAAAGC CTTGCCCACA CTTTCCTTTA TCATTTCCAT 
GTTCATGGCG CTGGCTACCG GAACGTCTTG GGGAACCATG TCTATTCTGT TTCCTTTGAT 
TCTGGTGCCA ACGTACGACG CCTCCAACGG TGATCCCACC ATTTTTTACG CCGTGACTGC 
CGGAGTTCTG AGCGGCAGCG TGGCCGGTGA CCACATGAGT CCAATTTCGG ATACCACAGT 
ACTAAGCGCC CTCGCCTGCG ATTGCGACCT CATCGCACAC GTGACTACTC AGGTACCCTA 
TGCCATGCTA GTGGTCCTCA CGAGTATCAT TTTGGGGACC GTGCCGATTG GCTACGATGC 
CTGGCCTAAT ATCATCGGAA TTCTCCTTGG AGCTATTCTG TTGATTGGAT TTGTGTACGG 
ACTCTGCGCA CCAGTAGTCA ACGCTACCGG GCGTTTTGAT CCCGTCACCG AGCTTTTCAT 
CAAGTTTTCC AGCCGCGGTG AAAAGGAATC CTCGCTTTTG CTCCTCAAGG AAGATACGAT 
CAAGAAAGCT GCTGGCGAAA ACGTCCAAGA GTCGAAGGAT CTCGATGTCA GCGAAGACGA 
TAGCTCCAAG AAATTGGAAG AAGCCGTCTA CGAGACGCCG ATTGGCGTCG AAGCAGGGGA 
TTCTCGCGAG GAGAATGAGA ATATGTAGTA GTGGAAAGGT TTTCTCTTGA AATTGCCGAT 
AAATGTTTTA CATGGGCGAG ACAGACCTTG AGCGTTTCTA CTTAAATTAT TTTTTATTGA 
TACGGGTTTG CTCAATGCCT CTCTCTGCAT TATAGCAAGA GTTAAGTTAG TTTCGGGCCT 
TTTTCATTTG ATCGCGAATA TCGGTGGAGC TGATATCTAC CCGGAAATCC TTGAGGAGCG 
TAAATTTCGC TCGTAACCTC TCCGGCAGCT GTCTCACGTC ATCTTCGCCA CTCACAAAAT 
CAGGGTCCCC CAACTTTTGT TGCACCCTTC CACCCACTAC GAAATGGCAA GCCATATCAT 
CTAAAGCGGC GATCATTTGC TCCTCACAAT CGTTGTAGTA TTTCGGATTT AATAAACGCA 
CCAAGGTATC AGTCCCTATC ACCATGTGCA GAGGAATTTT CTGATCGAAA GATCGTACCA 
CCTGCTGAGG TTGAAAGATA TCAACCTTTT GCTTGAAGAG TGGTGCATTT GTCAAAAGAA 
TACCCCAACG CTCCGGCATA TCAGCCAGCG TCAAAAAATG CTGAATTCGA CGGACAATCT 
CGTCACTCGC AAGACTCGGT TTGTCGGCAT TTGTTATGGA CAACTCAAAC CAAGCCACTT 
GACAACTAGA CTCTGTTAGC GCTGCTTGAA CCAGCTTTAC ATGACCCTCA TGCGGGGGAT 
TGAAGCTTCC TGGAAAAACC AAAGATTTGG GCGGTAAGAA CGCCTGCGTC AAACACTTGA 
AGCCTTCCGC GGTGGGGATT AATGAAACTG CTTCCTCTTC TCCGCATAAA ATTTTATCTG 
CTGCCTGGCG CACGACCTCG TCTGGATTAT ATCGTGCGGG AATAGGGAGT GTTATGCATA 
ACTGGTCACC ACAGCCTGTC GTCAGCTCCA GTAAGGTCGA AGGCGCTGAC GCACTTTCAA 
GTGCGTGCTC CAAGCACGTA AGTATACAGT GACTGACGAA GACATCTTCC TCAAATCTAC 
TGCGCTTCGT TGAATCGCTG TCTCCTCCAA CCAAATCAAT TTTCATGGCT ACTTGTCTAG 
CGTCCGAGAA AGAAACGGCA ACAAAGGCAC GGCTGTTCCT TTTCGAAGTA TCAGATCGCA 
AAGCCGAGGC GCAGCCAACA CCAATAGCGT GGGTCATATT TTGCAGCGGA AAGTGCCCGT 
ATTGAGGATC ACCCGCCGCC GAAAGCTTAA GCGCTTGTTT AAGGGCCGCT AGAGAAGAGA 
AAGAAGCCGA TTCCGCCGAG CAATATCGAA ATGTTTCCGA GTCGAGGTTT CGCTGCACAT 
ACTGTCGATA ACTTTCGCGA TCGTACGTCA GTGTTCCTTC CAGAAGAATA CTGGATGCTC 
CAGGAGTAGC TGCAAGGGTG GAAAGAAAGC TGCCCCCACC GCCGGCAACT GCCAAGGCGA 
GCCGGCAACT GGCACTGTGT CTTTTCCGAA AGTTGTTCAT GCGCTGTTGG AGGCTTTCAA 
GGGAAAAATT CTCGTCTTCA GCCGTACTGC TACTGACACT ACTATAGAGA GAGACCACTC 
TCGGCAACAT GCTAGCTCTG GTTTCTGGTG TCGTCATCAC AGTAGACGAC GGTCGACTTC 
CTTGTCGAGA GAAGAAACTT TTCGGCAACT TCCACAACAT GCGAGAGCTG AATGAAAGAC 
TTGACGTCGA GACGACCAAC GAGCAGAAGA GGAGACTAAC AGAATGCGAG GCGAAGAAGC 
GGATGAAAGA AGTACAAAAG GGCCTTCCCA GCATCTTCAC ACCTCTGGCG CTTTGACTTC 
GTTTTACGTG CACCCCTACA TAAGTTTTCG AATATGGTTG ACTGTAATGT AAAACGATCA 
AAG 

 

Protein sequence

MNLFRTIALL GLASPTVLAF DYQITGSESI VLTDVETGID KIATIFTDEQ ILVSVDGLTW 
EPSTTNVTES NNLLVWETFL DGQLQPQASG TQSLADTGRI LPTRIDAGEI VVGSGGRVNI 
RVEITVDGNT ITTEKEFEAY GSGVSIIPLL VVLVFALSTR MVEFSLFSGI FIGACMISGN 
LKDGFKSTLE DYILEALADV DHGYVYLFTL FLSGLVGMLE KSGGMYGFTK DVSRFATTPR 
TGQLACFSVG IFVFFDDYAN VLLAGETMRP LLDLLYVSRE KLSFIVDATS APIASLSPVS 
SWVGFEVGLI QTQLDIIVER AGTDDIGIKT SGLGVFLQSI KYRYYPIFMI VLMLGLIYSG 
RDFGPMLVAE RKTQVYERSD GGDGKGVASK NGTSEKHNAP KEGTPLKSWN MVFPVLVLIF 
FIFYMLVKTG EEPGTSQSFM DKIENSNSYS ALLWGTMAAV MLTTIFYLLQ PVKDGKVLVP 
VPSVVKELFF SRKEKDEDAE SPPRFLMTVH DSVESFLYGM GRIFPALIVL TLAWASGAIM 
IGVGADRLFS RWIVGGIDPK ALPTLSFIIS MFMALATGTS WGTMSILFPL ILVPTYDASN 
GDPTIFYAVT AGVLSGSVAG DHMSPISDTT VLSALACDCD LIAHVTTQVP YAMLVVLTSI 
ILGTVPIGYD AWPNIIGILL GAILLIGFVY GLCAPVVNAT GRFDPVTELF IKFSSRGEKE 
SSLLLLKEDT IKKAAGENVQ ESKDLDVSED DSSKKLEEAV YETPIGVEAG DSREENENM