Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_49055 |
Symbol | |
ID | 7195303 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011688 |
Strand | + |
Start bp | 445243 |
End bp | 446261 |
Gene Length | 1019 bp |
Protein Length | 256 aa |
Translation table | |
GC content | 48% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002183610 |
Protein GI | 219126744 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.135687 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CCAAGAACCT TCAAAAATGG TTTCACCTGT TCTCCTCCCT TCAGGCACTT GCACACTTTA CAGAGGCGCT CTTGCTTTGA ATGATATGGG CGTTTCGTTG CTCGAAAGAG GTGCCTATCG TGCTGCATTG GATACCTTGA AAGACGCTAT TTTCGTGATG AAACGAGTTT TCCCTTCGTC TCATCACCTC CACCCCGGCT CCTACGACAT TGACGCCAAG TTGAGCCGAG CTTATTCTAA ATTGGCGAGC TCCAAACTTG AAAAGCCTTG TTCACTTAAT GTCGAGATTG TCCCGCACAA CGTCGAGTTC GAAGCATTAC GTTCGGTGCT TCTCCGAACT TCAACTCCGT GCAACCGGCA GGTCAACTTT GTCATCAAGA TCGAAGTCTT TGACGCGGAA GATCAATGTG TTGATGTACA CAGTGCAATC CTTCTGCACA ACTTTGCTGT GGCGCATCTA TCCATGTCTA GCCTCGCCAA CTCCTCCAGC TTTGTGCAGC GGATCCGTGA CGGTGCCTTT CAATTGTCGA GCTTTGCTCG GCAAACTCTG GGCCATCTCA TGCAAGTCGA CGGACCCGAC ACTTTGGAAT ACTTGTTGCA GTGCAATCCC TGCTTAATTT TGGTCACTGC CGCCGTGCTG CACTGTCAGA TTCAGATTCT GGAGGAATCG GGTGGTGAAC AGTGGAGGGC GGTGAAATCC TATCAGAACC TGGTGTTACT GAGCGAAATT GCCCAAAACT TTGACAAACC TCAGCTCTGC AATAGCCGCA ACGCTGCGGC AGCTTGATTT CTATGTGCGT TACGCTTTGT CTAGGGATAC GTTGCAGCTG TAATCATCAC CTTTTTGTGT TATATTAATG ACATCGCATA TCGACGAAAA TAGTTATGAT CGAGTGAGAT TACACCGGAT AGTTGACGTA GACTTGGTGT GGAGCCTTCG AAACGTCATG TGAAGAAGAT TTGCATTTAG AATCGTGCGG TCGGCTTAGT ATTGACCTAC CTGGTTGCGT TGGAAGCAA
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Protein sequence | MVSPVLLPSG TCTLYRGALA LNDMGVSLLE RGAYRAALDT LKDAIFVMKR VFPSSHHLHP GSYDIDAKLS RAYSKLASSK LEKPCSLNVE IVPHNVEFEA LRSVLLRTST PCNRQVNFVI KIEVFDAEDQ CVDVHSAILL HNFAVAHLSM SSLANSSSFV QRIRDGAFQL SSFARQTLGH LMQVDGPDTL EYLLQCNPCL ILVTAAVLHC QIQILEESGG EQWRAVKSYQ NLVLLSEIAQ NFDKPQLCNS RNAAAA
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