Gene PHATRDRAFT_49055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_49055 
Symbol 
ID7195303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011688 
Strand
Start bp445243 
End bp446261 
Gene Length1019 bp 
Protein Length256 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002183610 
Protein GI219126744 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.135687 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CCAAGAACCT TCAAAAATGG TTTCACCTGT TCTCCTCCCT TCAGGCACTT GCACACTTTA 
CAGAGGCGCT CTTGCTTTGA ATGATATGGG CGTTTCGTTG CTCGAAAGAG GTGCCTATCG
TGCTGCATTG GATACCTTGA AAGACGCTAT TTTCGTGATG AAACGAGTTT TCCCTTCGTC
TCATCACCTC CACCCCGGCT CCTACGACAT TGACGCCAAG TTGAGCCGAG CTTATTCTAA
ATTGGCGAGC TCCAAACTTG AAAAGCCTTG TTCACTTAAT GTCGAGATTG TCCCGCACAA
CGTCGAGTTC GAAGCATTAC GTTCGGTGCT TCTCCGAACT TCAACTCCGT GCAACCGGCA
GGTCAACTTT GTCATCAAGA TCGAAGTCTT TGACGCGGAA GATCAATGTG TTGATGTACA
CAGTGCAATC CTTCTGCACA ACTTTGCTGT GGCGCATCTA TCCATGTCTA GCCTCGCCAA
CTCCTCCAGC TTTGTGCAGC GGATCCGTGA CGGTGCCTTT CAATTGTCGA GCTTTGCTCG
GCAAACTCTG GGCCATCTCA TGCAAGTCGA CGGACCCGAC ACTTTGGAAT ACTTGTTGCA
GTGCAATCCC TGCTTAATTT TGGTCACTGC CGCCGTGCTG CACTGTCAGA TTCAGATTCT
GGAGGAATCG GGTGGTGAAC AGTGGAGGGC GGTGAAATCC TATCAGAACC TGGTGTTACT
GAGCGAAATT GCCCAAAACT TTGACAAACC TCAGCTCTGC AATAGCCGCA ACGCTGCGGC
AGCTTGATTT CTATGTGCGT TACGCTTTGT CTAGGGATAC GTTGCAGCTG TAATCATCAC
CTTTTTGTGT TATATTAATG ACATCGCATA TCGACGAAAA TAGTTATGAT CGAGTGAGAT
TACACCGGAT AGTTGACGTA GACTTGGTGT GGAGCCTTCG AAACGTCATG TGAAGAAGAT
TTGCATTTAG AATCGTGCGG TCGGCTTAGT ATTGACCTAC CTGGTTGCGT TGGAAGCAA
 
Protein sequence
MVSPVLLPSG TCTLYRGALA LNDMGVSLLE RGAYRAALDT LKDAIFVMKR VFPSSHHLHP 
GSYDIDAKLS RAYSKLASSK LEKPCSLNVE IVPHNVEFEA LRSVLLRTST PCNRQVNFVI
KIEVFDAEDQ CVDVHSAILL HNFAVAHLSM SSLANSSSFV QRIRDGAFQL SSFARQTLGH
LMQVDGPDTL EYLLQCNPCL ILVTAAVLHC QIQILEESGG EQWRAVKSYQ NLVLLSEIAQ
NFDKPQLCNS RNAAAA