Gene PHATRDRAFT_48977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_48977 
Symbol 
ID7195251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011688 
Strand
Start bp209881 
End bp211185 
Gene Length1305 bp 
Protein Length354 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002183571 
Protein GI219126663 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.921701 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTTATCTTAA CGAATGAAAG GGGCAAAACT TGTCACCATT TGTCTACTAA ACTGAAGATA 
GGGAAATGAT TGCCATTATC GCTGCGGGTC TATTGGCTCT TCCAGCGCTG CTGGTCCAAG
TAGCCACGGC TCTGATTGTG GCGTTTCTGT CGGTACCAGC CTTGTGCATT CTCTTGTTCC
GCAAGCCCCG TCATCTACGC CCTAACCTCG GCGACCCGGA TGGCGATGCT CACGTTATCA
TTACAGGTGG TAGCAGCGGG ATTGGTCTTT CGATTGCGAG AGAATGTGTG CGGCGGGGAG
TGCGTCGTGT GACGATACTT GCAAGAACCG TTTCCAAACT AGAAACCGCC AAAAAAGAAC
TCGAGGAATT GAATGCTCAA AGTAAAAAAA CCAAACAGAT CAAGGCCGTG TCGGTTGATG
TTACGGATTA CAAAGCACTG GAGAAGACGG CGCTGGAACT GCTGGGGAAA ACCCCTAGCC
ACTCCACTTA TCTTTTTTGC TGTGCGGGAG AAACCGAACC CGCGTATTTT GATGACATCC
CACCAGATGT TTTTGCCCGC ATCACGCAGA CGAACCAATT AGGTTCCATT TACACCACAA
AAGCATTTCT ACCACATATG AAAGCAGGAA CAATATGTTT CTGTAGTAGC ATTTGCGGGC
AGATTGGTAT TTTTGGGTAT TCTGCCTATT CGCCGACCAA ATTTGCACTC CGTGGATTTG
CCGAGTGTCT GCACGTCGAA TTGTGTAACA GCCCCGTCAA CGTCCAGATC GCCTATCCAC
CCGATACCGA TACGCCGGGA TTTGAAAAGG AAAACGTTGC TAAACCGAAG GAGACTCAGT
TGATTTCAGA GCAAGGCGGC TTGTCGAAAC CCGACGATAT AGCGCGAGTC ATGGTAACGG
AGGCTTTTCG TCCTAATCCC CGCTTCAACG TGTACTTTAC CTTTGACGCC TGGATGCTGA
GCTCGTTGAC GGCTGGATTT TCGCCCATAG CTACTATGCA AGACGGAGTG AGCCAGGTGG
CGGGCATGGC GCTATTTCGC TTCGTCAGTT TGTTTTATTT GCACGATTGG TGGCGTATCG
TTCGGAAGTT TCAAGAAGAA CGTGACGCGG AAATGAGCAA GACCAAATAG GTGGACGATA
CCAGGTTACA GAACTCTCTT GTTCAGGTAT GTACTGTCCT TCGGCGTCTT CCACCTATTT
TCGACGGTCC TGCTCGAGAG CCGAAGCAAT GTCTTGCCCG TTGGAGCTCA GGTTGTCGGT
CATCAGCTAC AGCTACGGTT TGACTAGGTC CATTCTGCAT ATGTT
 
Protein sequence
MIAIIAAGLL ALPALLVQVA TALIVAFLSV PALCILLFRK PRHLRPNLGD PDGDAHVIIT 
GGSSGIGLSI ARECVRRGVR RVTILARTVS KLETAKKELE ELNAQSKKTK QIKAVSVDVT
DYKALEKTAL ELLGKTPSHS TYLFCCAGET EPAYFDDIPP DVFARITQTN QLGSIYTTKA
FLPHMKAGTI CFCSSICGQI GIFGYSAYSP TKFALRGFAE CLHVELCNSP VNVQIAYPPD
TDTPGFEKEN VAKPKETQLI SEQGGLSKPD DIARVMVTEA FRPNPRFNVY FTFDAWMLSS
LTAGFSPIAT MQDGVSQVAG MALFRFVSLF YLHDWWRIVR KFQEERDAEM SKTK