Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_48977 |
Symbol | |
ID | 7195251 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011688 |
Strand | + |
Start bp | 209881 |
End bp | 211185 |
Gene Length | 1305 bp |
Protein Length | 354 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002183571 |
Protein GI | 219126663 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.921701 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTTATCTTAA CGAATGAAAG GGGCAAAACT TGTCACCATT TGTCTACTAA ACTGAAGATA GGGAAATGAT TGCCATTATC GCTGCGGGTC TATTGGCTCT TCCAGCGCTG CTGGTCCAAG TAGCCACGGC TCTGATTGTG GCGTTTCTGT CGGTACCAGC CTTGTGCATT CTCTTGTTCC GCAAGCCCCG TCATCTACGC CCTAACCTCG GCGACCCGGA TGGCGATGCT CACGTTATCA TTACAGGTGG TAGCAGCGGG ATTGGTCTTT CGATTGCGAG AGAATGTGTG CGGCGGGGAG TGCGTCGTGT GACGATACTT GCAAGAACCG TTTCCAAACT AGAAACCGCC AAAAAAGAAC TCGAGGAATT GAATGCTCAA AGTAAAAAAA CCAAACAGAT CAAGGCCGTG TCGGTTGATG TTACGGATTA CAAAGCACTG GAGAAGACGG CGCTGGAACT GCTGGGGAAA ACCCCTAGCC ACTCCACTTA TCTTTTTTGC TGTGCGGGAG AAACCGAACC CGCGTATTTT GATGACATCC CACCAGATGT TTTTGCCCGC ATCACGCAGA CGAACCAATT AGGTTCCATT TACACCACAA AAGCATTTCT ACCACATATG AAAGCAGGAA CAATATGTTT CTGTAGTAGC ATTTGCGGGC AGATTGGTAT TTTTGGGTAT TCTGCCTATT CGCCGACCAA ATTTGCACTC CGTGGATTTG CCGAGTGTCT GCACGTCGAA TTGTGTAACA GCCCCGTCAA CGTCCAGATC GCCTATCCAC CCGATACCGA TACGCCGGGA TTTGAAAAGG AAAACGTTGC TAAACCGAAG GAGACTCAGT TGATTTCAGA GCAAGGCGGC TTGTCGAAAC CCGACGATAT AGCGCGAGTC ATGGTAACGG AGGCTTTTCG TCCTAATCCC CGCTTCAACG TGTACTTTAC CTTTGACGCC TGGATGCTGA GCTCGTTGAC GGCTGGATTT TCGCCCATAG CTACTATGCA AGACGGAGTG AGCCAGGTGG CGGGCATGGC GCTATTTCGC TTCGTCAGTT TGTTTTATTT GCACGATTGG TGGCGTATCG TTCGGAAGTT TCAAGAAGAA CGTGACGCGG AAATGAGCAA GACCAAATAG GTGGACGATA CCAGGTTACA GAACTCTCTT GTTCAGGTAT GTACTGTCCT TCGGCGTCTT CCACCTATTT TCGACGGTCC TGCTCGAGAG CCGAAGCAAT GTCTTGCCCG TTGGAGCTCA GGTTGTCGGT CATCAGCTAC AGCTACGGTT TGACTAGGTC CATTCTGCAT ATGTT
|
Protein sequence | MIAIIAAGLL ALPALLVQVA TALIVAFLSV PALCILLFRK PRHLRPNLGD PDGDAHVIIT GGSSGIGLSI ARECVRRGVR RVTILARTVS KLETAKKELE ELNAQSKKTK QIKAVSVDVT DYKALEKTAL ELLGKTPSHS TYLFCCAGET EPAYFDDIPP DVFARITQTN QLGSIYTTKA FLPHMKAGTI CFCSSICGQI GIFGYSAYSP TKFALRGFAE CLHVELCNSP VNVQIAYPPD TDTPGFEKEN VAKPKETQLI SEQGGLSKPD DIARVMVTEA FRPNPRFNVY FTFDAWMLSS LTAGFSPIAT MQDGVSQVAG MALFRFVSLF YLHDWWRIVR KFQEERDAEM SKTK
|
| |