| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_48952 |
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| Symbol | |
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| ID | 7195369 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011688 |
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| Strand | - |
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| Start bp | 127571 |
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| End bp | 130650 |
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| Gene Length | 3080 bp |
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| Protein Length | 791 aa |
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| Translation table | |
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| GC content | 50% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002183682 |
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| Protein GI | 219126894 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTCAGTCCAA TCCGAACCAA GGCCCGCTTG TGTATTGCCG AGAGAAGAAG GGTCTCGATT
GAGAAGAGCA CTTCGTGGTG CATTTTGTTA TCGCCTCGCT CCATCGGCCT TTCATTCGAG
CTACTGGTTC CCCAGTATTC TACATGATAT ATTTTGTAGT TTTTTACGGT AGCTTGAATT
CGATTGCAGA AGTATTTTTA CGTTGAGTAT ACGTATTGTA TTAGCTCTTT GTCGATAAAA
TCCTTTTATT TCCCACAACA ACATGGAAAA ACCACCCCCG ACTGTCGCAG ATCTGTAAGT
CTCTGTAGCG ATCGCAGGCG TCTTCGCTCT TGTCTCTCGT TTGGCCGATT GTCTCATATT
CTCTCCATTG TTCGCCAATA TTTCTTGTCC TCCGCTACAC AATTTTGCTG CTGTGCAGCG
TCTTGATCGG TGGCGGTCAC GCGCACGCGC ACGTTCTGAA AATGCTCGGC ATGAAAAGCA
CCGCGCATTC CTCACGCAAC ACGGTATACG GATCACCCTC ATTGCCAAGG ACATACACAC
CCCGTATTCC GGTATGCTTC CCGGCTTCGT GGCGGGACAC TACGATCACG ATCAGATTCA
TCTGGATCTG AATCAGTTAT GTCACGTGGC CAATGCACGA CTCGTTCACG CGGCGGCCTG
CAAAATTACC TACCGCAACG GTGGCGGTGG ACTCGTCTAC CTGAACGATG GCCGTCCCCC
CATACGGTAC GATTGCGTTT CCATTGATAT CGGGAGTGCC CCGGCGTATG GTGACGTTGT
GTGCCAGCCC GGTGTGGTAC CAGTCAAACC GATCGCCAAT TTTTGCACAG CTTACCAAGC
ACTCGTCAAC CGTTGGGAAA ATGAAACACC ATCGTCCACA GCAGCAAATG ACCAGGACAC
GACGTCAACC AACGGCACAA GGGCAGAACC GCCAAGCCCC TACGTCGTGG CGGTTGTTGG
TGGTGGTGCG GGAGGGTTGG AACTCGCCTT GTCAGTTCAA TATCGGTTGC GAAGCATCAA
CCCAAATGCT CCGTTACGCC TCTTGGTTGT CACGCGCGGG AAGACAATAC TGGAAGGACA
CAATCATCGA GTCCAGGCCA AGTTCCAACG CATTATGCAG GAAAGAAATA TCGAAATTTA
CTACCTCGCC ACCGTTGTAA AGGTGGCAGA AGACTCATCC ACAATGCGCA AGCGCCTTAT
TCTTTCGCCA GAAGGCGCCG CTGTGCACGG CCGAGACTCA TTCGTCGTCG ATGCTTGTTT
ATGGTGCGTC ACGGCGGGTG TCGCGCCGTG GCTGAAAGCT GACACGCCAT TCGCCACGAC
GAAGCAAGGA TTTCTCCGTG TCCACGATAC GTACGAATCA ATTGAACATC CTGGAGTCTT
CGCCGCCGGC GATTGCTGTC ACGTAGACAA GCATCCGAGA CCCAAAGGTA TGGCTAGTCT
GTCTAGATGC AAATCTTAGC ACTCATGGAT CTAGTCATTC CTAACTATTT TCACATTGTC
TTACATTCAA ATCCAGCTGG AGTATTTGCT GTACGGGCCG GACCATACTT GCTTGACAAC
TTGCTGCGAT ATGTTTCTTC AAAGCCCCTT ATTTCGCACA AACCCCAAAG TCATTTTCTG
GGTATTTTAG CGACCGGGAA CAAGTATGGT GTAGCGTCGA AATCATGGTG GTTAGCCACG
GAAGGATCTT GGATATGGAC CTGGAAAGAT TACATTGATC GTACCTGGAT GGCCAAATAC
AGTACTGATC TACCCGATCT TAAAGACATG ATGGCGAATC AAAAGCACTC AACTCAGCAA
AGCGGCCAAC AAACGAATGC TTTTGTTGCT TCTAAAGGGG ACGAAGTACT GCAGGCCTTT
ACATCAGATC CAATGCGGTG TGGAGGGTGC GGCGCCAAAG TTGGGGCCAC GATCGTTTCA
CGCGTCTTGG CAGCTGTCTA CGAACGGCAA ATTGAACGAG CTAAATTATT GGGGCTGCCC
CAGCCGTCAC GGATCGATCA CGACGATGCA GCGGTTCAGA TACTTCCAAA TAAAGCAGGT
GGCGCCATTG TTCAAACTAT TGACTACTTT CGAGAAATCG TAAAGGATCC ATTTACCTTC
GGGAAAATTG TGGCAGTCCA TGCTCTAAGC GATATCCACG CTATGGGGGC GACTCCCCAA
ACAGCCATGA CACTGGCTGT TGCACCGTTT GCTGCTGACG AAGAGGTAAC AGAATCGACT
CTATTGCATT TACTTAGTGG AGTCAGTGAT ATTTTGCAGG ATGAAAATGT GCAGCTTGTT
GGTGGACACA CTTGTGAAGG ATTGGAGTTA GCATGCGGAT TGAGTGTCCA AGGATATACG
GATAATCCGA AACTGCTCTT ACGTAAGCAA GGTGGTGCAA TAGGAGATAA AATCGTCTTG
ACCAAGCCAA TAGGTACCGG GGCACTCTTT GCAGCCGACA TGAGGGCTCG TTGTAAAGGC
TCATATATGT CGGAAGCCCT CGACAGCATG ATTCACAGCA ATTGCCATGC AAGCCAAGTT
GCGATGCGAG CAAAGGGCAT CAGATCGTGC ACTGACGTCA CTGGTTTCGG TCTCATTGGT
CATTTGCTCG AAATGCTCAT GGCAAACGAA ACGGTTAAGG AATTGGACAG CATCGGCGCG
GTAGTAAACA TTGGCGATAT CGATTTTCTA CGCGGTGGGT TAGAGGCATC TGCGAATGGC
ATTTTTTCGA CACTCCAATC ACAAAACGGG CGAAATCGAC GCGCTATTGT CAATCACACT
GAAGCCGCTG AAAAGTATCC GGTCAAGTAC CCACTATTGT TCGACCCTCA GACTGCTGGC
GGTCTAATGT TTTTCGTCGA TGCTCTGAGT GCTAGTGAAT TTCTAGCTGA ACTACGTGCG
GCTGATGTGA ATGCCCATAT AGTGGGAGAG CTAGTTTCAT ATCCTGCAGA AAGTAATGCG
GCCGCCGGTT TCTCCGAGAG TGTTTGCACG ATTGGAAGTG GCGGAGCAGT GACGGGCAAA
AGGATCCGTG TGCGGTAACA GCGGACGCCG GACCAATTTT TGTTCCGCGA TTCCACTGTG
TTAAGAAAGC AGTCTCTACT
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| Protein sequence | MLPGFVAGHY DHDQIHLDLN QLCHVANARL VHAAACKITY RNGGGGLVYL NDGRPPIRYD
CVSIDIGSAP AYGDVVCQPG VVPVKPIANF CTAYQALVNR WENETPSSTA ANDQDTTSTN
GTRAEPPSPY VVAVVGGGAG GLELALSVQY RLRSINPNAP LRLLVVTRGK TILEGHNHRV
QAKFQRIMQE RNIEIYYLAT VVKVAEDSST MRKRLILSPE GAAVHGRDSF VVDACLWCVT
AGVAPWLKAD TPFATTKQGF LRVHDTYESI EHPGVFAAGD CCHVDKHPRP KAGVFAVRAG
PYLLDNLLRY VSSKPLISHK PQSHFLGILA TGNKYGVASK SWWLATEGSW IWTWKDYIDR
TWMAKYSTDL PDLKDMMANQ KHSTQQSGQQ TNAFVASKGD EVLQAFTSDP MRCGGCGAKV
GATIVSRVLA AVYERQIERA KLLGLPQPSR IDHDDAAVQI LPNKAGGAIV QTIDYFREIV
KDPFTFGKIV AVHALSDIHA MGATPQTAMT LAVAPFAADE EVTESTLLHL LSGVSDILQD
ENVQLVGGHT CEGLELACGL SVQGYTDNPK LLLRKQGGAI GDKIVLTKPI GTGALFAADM
RARCKGSYMS EALDSMIHSN CHASQVAMRA KGIRSCTDVT GFGLIGHLLE MLMANETVKE
LDSIGAVVNI GDIDFLRGGL EASANGIFST LQSQNGRNRR AIVNHTEAAE KYPVKYPLLF
DPQTAGGLMF FVDALSASEF LAELRAADVN AHIVGELVSY PAESNAAAGF SESVCTIGSG
GAVTGKRIRV R
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