| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_48946 |
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| Symbol | |
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| ID | 7195229 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011688 |
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| Strand | - |
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| Start bp | 105670 |
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| End bp | 107113 |
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| Gene Length | 1444 bp |
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| Protein Length | 417 aa |
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| Translation table | |
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| GC content | 51% |
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| IMG OID | |
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| Product | 2-hydroxyacid dehydrogenase |
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| Protein accession | XP_002183675 |
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| Protein GI | 219126879 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CTCTATCCCT TGTCAAGGCT TGGTGGAGTT TTTTGCAAGT ACGGTATTTA TTCTTAGTCC
TAGATAGTCT GCTTATCCCC ATTCAAGATC GTGCATCAGC AAGCAATGTT AGCTGCTCCT
TCTCTGCTTC GATCTGCGGT TCGCACGACG GTATCTCGCC GGGGGATCGC CTGGTACCAC
TCATCCGCCG CACTGTTTGT CGACGACGAC AATAAGTCCC AGAGCAGCCC GAACGTCAAA
ACATACTGGG CCGATCCTCA GCTCCGCCAG TACAAATTTT GGAATCGCTA TGATAAAACC
AATCAAGGAA AGTATCAGTA CTTGATCGAC TTTTCTCCCG AATCGATTCA AAAGGAAGCT
AAGATACTGT CGCTTTCGGA TCCCGACGAC GCGGCCAACC AGCCCTTACA CAATGGTTCC
TTGCCGATGG GTGCGTCTCT CATGGGGATT GGTACCACCT TGGCCGATTT TGAGCCTTAC
CGGGATGCCA AACCCAATGT ACTGTTTGTC AGTCCCAGTT GTCCCCGGGC TCCCGCCGTC
TTGCCCCTCG TACTCGCTGC CTTTCCCTCC ATTGAATGGA TCCATTGTCG CTCGGCAGGC
ATAGATTTCA TCGAAAGTGA CGAATTTACC GAACTCGCCA CAAGTATGAG TATTCCAGTC
ACCAATGCCA AAGGACAATT CAGTAGTTCC TTGGCGGAAT ACGCTCTCAT GGCCTGCTCG
TACTTTGCCA AGGACTTGCC GAGACTCATG CGCAACCAGA AAAACCGCAA TTGGGAGAAG
TACGACGTCG AGGAACTTCG TGGTAAAACG CTCGGTGTGG TCGGCTACGG AGACATTGGA
CGGTACGTGA TTTTCTATTA TGAAAGGGCG GCGATCGTGT TGATTCTCCA AGCACTCCGT
CTCACTAGTA TTTCTGTGGC GCACTAGTGC CTGCGCAAAG CTCGCCACCG TGTACGGAAT
GCGTATTATT GCGCTCCGTC GTCATCCCTT CCTGTCCAAA GACGATCCCT ATTGTGACGT
TGTTTACGGC CGCGACAAGG CCAGTCTCAA TCGTCTCATG AGTGAATCCG ATTACATCAT
TTGCTCGGCG CCGTCGACGG TCGAAACGCG CGGAATGGTC AATGCAGATG CCTTCAATGC
AGTCAAAAAG AACGCGGTAT TTATCAATTT GGGACGTGGA CCCGTCGTGG ATGAACAAGC
TTTGATTGAA GCCCTCCAAA CGGGAAAACT CCGAGGCGCC GCTCTGGATG TCTTTACCGA
AGAGCCATTG CCGAGTTCGT CCACCATGTG GGACCTGCCG AACGTACTGA TTAGTCCACA
CAATATGGAT CAAACATCAA CCTTTATGCA CGAGGCGACC GAATTCTTTT TACACGAAAA
TTTGCCGCGG TTCATGGTCG GTGAAGATTT GTTGAACCCC GTAGACCCCA CGCTGGGGTA
TTAA
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| Protein sequence | MLAAPSLLRS AVRTTVSRRG IAWYHSSAAL FVDDDNKSQS SPNVKTYWAD PQLRQYKFWN
RYDKTNQGKY QYLIDFSPES IQKEAKILSL SDPDDAANQP LHNGSLPMGA SLMGIGTTLA
DFEPYRDAKP NVLFVSPSCP RAPAVLPLVL AAFPSIEWIH CRSAGIDFIE SDEFTELATS
MSIPVTNAKG QFSSSLAEYA LMACSYFAKD LPRLMRNQKN RNWEKYDVEE LRGKTLGVVG
YGDIGRACAK LATVYGMRII ALRRHPFLSK DDPYCDVVYG RDKASLNRLM SESDYIICSA
PSTVETRGMV NADAFNAVKK NAVFINLGRG PVVDEQALIE ALQTGKLRGA ALDVFTEEPL
PSSSTMWDLP NVLISPHNMD QTSTFMHEAT EFFLHENLPR FMVGEDLLNP VDPTLGY
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