| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_48938 |
|---|
| Symbol | |
|---|
| ID | 7195225 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011688 |
|---|
| Strand | - |
|---|
| Start bp | 85119 |
|---|
| End bp | 85998 |
|---|
| Gene Length | 880 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | |
|---|
| GC content | 56% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002183671 |
|---|
| Protein GI | 219126871 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.94159 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTTG TGTTGGCCTC TACGTTGACC TTCACCGCGG TACACGCGTT TGCTCCGTTG
GCACCGCGTT GCGGGAAACC CTTTGTCGTC CCGACGAAGA CCGTACTCGC GGACGATAAG
GGCGGCATGT TCTTTGCGTC GTCCGATGAG ACGCAGACTC CCGAAGCGAC CAAAACTACC
AAGGACGACC AGTCGTTGGA GGAAGAAGTC GAAGCGATGG TGCAGAAAGC CTTGAAGAAG
AACAAGATCA TTTCGAATCT CCGCAGTGAA CGCGGAAACG AGTACGCTCC CTGGATGGGC
ATCACCGAGA ACGACGAGAA CGAGATACGG AAAATCATGC GCGACAAGGC CGAAGTCCGC
CGTCGCCGAA GAGACGAGGA ACTCACCGTC CGGGGTGCCC TGCTCAAGGA TAGTACGGTA
CAGGAACTCT CCGGGACAGG ACTCAAGAGT AAAGTCGTGG ACGGGACTTC CGTAGAGTTG
GAGTGGTCGA CGGGGGGCGA AACATCCACC AAGGGATTCA TCATCAAGCG CCGGGCCGCC
AAGCAGCCAG ATTTTGAAGT TCTGGCGTCG TACGAAACCT ACGGTCCCCT AGTTTCCAAA
GGAGTCGAGG GAGGAGACTA TCGATACCTC GACGAAAATG TGGGCTACGG CAGTTGGTTC
TACCGTATCA CCGAGTGCGA AGAAAGCGGT TTGGAGAATG ACATGAGCCA ATGTTTGGTC
GATGTGGAGA CGGACGAGGA ACAGAGAGGT GCCGTCTTGG CGGCCGGTGC CATGGCGCTG
GCCGCCGTTG CCGCCGTTGT GGCCGGTTCG CTTTTGGACC CCGTGCAGTA CTAACCGCGA
GCACACATCG GAACACGTTG TGCCACTAAA CTATCTATTG
|
|---|
| Protein sequence | MKFVLASTLT FTAVHAFAPL APRCGKPFVV PTKTVLADDK GGMFFASSDE TQTPEATKTT
KDDQSLEEEV EAMVQKALKK NKIISNLRSE RGNEYAPWMG ITENDENEIR KIMRDKAEVR
RRRRDEELTV RGALLKDSTV QELSGTGLKS KVVDGTSVEL EWSTGGETST KGFIIKRRAA
KQPDFEVLAS YETYGPLVSK GVEGGDYRYL DENVGYGSWF YRITECEESG LENDMSQCLV
DVETDEEQRG AVLAAGAMAL AAVAAVVAGS LLDPVQY
|
|---|
| |