| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_48922 |
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| Symbol | |
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| ID | 7195349 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011688 |
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| Strand | - |
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| Start bp | 36395 |
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| End bp | 39615 |
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| Gene Length | 3221 bp |
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| Protein Length | 965 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002183659 |
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| Protein GI | 219126846 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGCAGA ATTCACCGAC AGTACCCAAA GTAATCACTG GTAAAATAAT GGACGAATCA
CTCTATGAGC TGGTTCTTGA GCACTTGAAC AATTATCAAC AAGCTATTGT TGTGGACAAC
CGCGGGGAGA ATGATGCGTT GCTCGATAGG CTGTCTCGTT CATTTGGGGA TAAGCTCAAT
GAACTCGTCG TGACGGGATC GCTCGAGAAA ATGGGCTTCC GAGATGCTTC ATCCAGTGAC
ATGATCCAGT CCGATAAGAA TCAGGATTCC GTGGAAAGCC AGTTGGGATG CATACTTGTA
TCCTTCGTAG ACACGGTTGT CTCCACCGCA GAGCTTTCGG CAACAACGAA AGACTCCGTT
TTCGCCTTGT TGGAGGCTAT TGCTTGCTTG GCTTCTACCT CTCTCGTTTC CTCACTTTCG
GTGTTGACTC GTGCAATTGA GTTCTCCAAC GTTCTATTAG AACGCGTTAG AAACGTTGCT
TGTCGACTGA TTGGGAATCT TGTCGGATTC TGGATGCAGA GTTCAGCGCA GCACCTTTTT
CACGGTCTTC TCGACCAGGC GTCACAGGCT GTACTGCCTC GCTTTACGGA CAAGACCCAG
TCAGTTCGGA ACGCGGCCAT TATCGCTGCT AAACAATTCT TCACCGGAAC CATTGATGAT
GCCGATTTGC GGACTGCCTT GGTGTGGAGT GTCCAACACG ACCCGTCCGT TACTAATCGC
CTGCAGGCTC TCGAAAGCCT GCCACTAAAC GGCCAAACAT TGGATATCAT TGTTGCCCGA
ATTGCCGACG TGAAACCTAA AGTCCGAGTT GCAGCCTTAC ATAAGCTTTC TACCGTTTCC
ACTTGGCAAT CACACGAACG AGCGGCGCTC GTGCGAGCTG GTCTTTCCAA GCGGTACGTG
CTACGACAGA CACGCAAGCT GATCATGACG TACCTTGCTT ATGTACTAAT CACTTGACCT
CCGCTACATC CTTTTGTCTT CATCAATCTA CAGCTGTACT GCCACGCGGG ACGCGACCGT
CAAAATGGTT TGCCAGGCTT GGATGAAAGC CGTCAAATAC GAACCACTGG AACTTCTTCG
TGGATTGGAC GTGGTGAATT TTGAAGAGGA GGCAGCTCAA GTTGTCAAAC TATTGCTAGA
CGCGACCAAG GACCCTACAG CGTACCTGGA AGAGTTGTCG ATGAGTCCAC CCGAAGTACG
TGCGTTTGTT GAGAATGTGA ACGCGTCGTC TTCCCTTGTG ATTGCAAATG CTGAACAAGT
TTTGACGCCA GAGGCGTTAC TGTGGGCTCG TGTAGCTGTC CAACACACCA AAACATCGCA
ATCAAACTCT CGAGCTGAGG CCATGCTTTC CCTCATCATC CCTGAAGTTC CCATTCTTTG
CTCTGTTGTC GAGAACCACG CCGCCCAACT CATGACAGTG CTTAGTGAGC AGTACGAAGA
TGAGGACGGC GGCTTGGTGG ATAGCCTCGT CACAATTTGC TTGCAGCTCT TACAGCTAGC
GACGTGCGTT TCAAAGTCTT CGATGGAAGA AGGATCGCGT CGAGTCTTTA CTGCCGTCAT
GAAACGCATG CTCAGTTCCG TCGTTACACC GGACGACCTT GTCGAAGGCT GCGTTCAAGC
CCTACACTCC GTTTGCATCC TCGAAAAAGA TCTCGTCGAC GCAACCAGCG AAATAATTGC
CGAACTCAGT CGTCTGAGCC AAGAGCACGC GGAGTTGCAA AAACAGCATC ACTTGCGCAT
ACTTGCAATT CTCAGCCTAG TCTTGGAACG TGTGTCTCCC GGATTTGGTT CAAATCCCGA
TGCTTTAACA TCCTGGGCGA CTCATATTAT CCCAGCTGTA ACCAGTGAGA ATCTATTGAT
CCGTCAACTC GGCGTTTCTT GCTTTGGCAA GCTCGGTTTG TTTACCCCTG TCGACACAAT
CTCGGAACAA TTCCTCCCAC TAATATTGCG CATGGCGTCA AACGAAGTGG AGACGGACGA
AATACGCGCT CAAGCCTTGC TTGCCCTCTC GGATTGGGCT ACGCTATTCC CAGTTGTCTT
AAAAACTCAA GAGTTAGACG GGAAGATGGT GTCTATTTCA GACGTTGTCC ATTATTGGCT
CGATAATCTT CCGAAGGGGT CGGGCAATCA TACGTCTTTG GCTTTTATAG CTGCAGAGGT
TGCAACGAAG CTCTTATGGT CGGGACGAAT TGTGGACAGC TCATGGTTGG CCAACCTTGT
GGTCATATTC TTTGACCCCA ATCTTTCGAC TGGGGAAATG GAGGAAGAGT ACCACGAAGA
GGAATCAAAG GAAATTGGGA GCCTCGTTCG TTGGCAACAG TTGCAGAGCG TGTTCTTTCC
CGCATACGTT CGTCGTGGTC CTGTTTATCA AGAGGCTCTG TTGAATTCCA TTTCTCACAT
CTTGCAGGTT TTCTCCTCTC GCTCGCAAAA AACAACACGT GGCAAATCGC TGCCCGTTGT
AAAAATGATT GATTTCGTCT GCGCCTTGGT AGAGGAAGGA GTAGCCAAAG CAGACTCGAC
AAAAAGTGCT ACGGAACTTG ACAATGCGAA AGACGAAGAA TGCATGGCAC TCACGTCTGT
CGGACTTTCT TCCGCAGTTC AGATTGCCAC TTTTCTATAC GCTAGTCACG ACAATCTCAA
TGCGGCGGGT CTACGAGCGC TTTGCAAATA CTTGGGCAAC ATCAAATTAG ATTTGAGACG
AGTTTGTTCA ATAGAACTGG TGAAGCTCAA GGGGTCCGTC GAAGACCTGA CCATGGCAGT
CTCTGACTCG ACGTGTCTTC GCGCGTTGGA CTTGCTTACG GAGAAACTGG CCGGTGTCGA
GATCCCTGAT AGCGAAGAAA GCTCGGATGG CGAAGAATCC CTAACGGAAG CAATGGGCGA
TCTGCAGGTA GGAAAAGAGA ACTCGATTCG GCAGGACAGT ACCGCATTGA AGGGGGATCC
TGCAGCCGTA ATCCCCGTAA CTTCCAACAA TCGAGCTACC CTTTCTTACG TAAACTAAGA
GTAAAGGGAA CTGTATCTGA AAGCACATTT AAGTCGTCTG TCAGAGTGAG TTGCTTTCGC
CGCTGTCCAC GGAAGAACTA TAAAACACCA TCAATCTACC GGACCGAGTT TGAAAACAAG
GTACATTGAC TGTGGATATG AGCAGACCGT CTTCTCGCTC GATTTGAGGC TGAATAAGGT
CAAGTGCGCC TAACAGTAAA TTACTTCGAG AAGATGGCTA A
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| Protein sequence | MVQNSPTVPK VITGKIMDES LYELVLEHLN NYQQAIVVDN RGENDALLDR LSRSFGDKLN
ELVVTGSLEK MGFRDASSSD MIQSDKNQDS VESQLGCILV SFVDTVVSTA ELSATTKDSV
FALLEAIACL ASTSLVSSLS VLTRAIEFSN VLLERVRNVA CRLIGNLVGF WMQSSAQHLF
HGLLDQASQA VLPRFTDKTQ SVRNAAIIAA KQFFTGTIDD ADLRTALVWS VQHDPSVTNR
LQALESLPLN GQTLDIIVAR IADVKPKVRV AALHKLSTVS TWQSHERAAL VRAGLSKRCT
ATRDATVKMV CQAWMKAVKY EPLELLRGLD VVNFEEEAAQ VVKLLLDATK DPTAYLEELS
MSPPEVRAFV ENVNASSSLV IANAEQVLTP EALLWARVAV QHTKTSQSNS RAEAMLSLII
PEVPILCSVV ENHAAQLMTV LSEQYEDEDG GLVDSLVTIC LQLLQLATCV SKSSMEEGSR
RVFTAVMKRM LSSVVTPDDL VEGCVQALHS VCILEKDLVD ATSEIIAELS RLSQEHAELQ
KQHHLRILAI LSLVLERVSP GFGSNPDALT SWATHIIPAV TSENLLIRQL GVSCFGKLGL
FTPVDTISEQ FLPLILRMAS NEVETDEIRA QALLALSDWA TLFPVVLKTQ ELDGKMVSIS
DVVHYWLDNL PKGSGNHTSL AFIAAEVATK LLWSGRIVDS SWLANLVVIF FDPNLSTGEM
EEEYHEEESK EIGSLVRWQQ LQSVFFPAYV RRGPVYQEAL LNSISHILQV FSSRSQKTTR
GKSLPVVKMI DFVCALVEEG VAKADSTKSA TELDNAKDEE CMALTSVGLS SAVQIATFLY
ASHDNLNAAG LRALCKYLGN IKLDLRRVCS IELVKLKGSV EDLTMAVSDS TCLRALDLLT
EKLAGVEIPD SEESSDGEES LTEAMGDLQV GKENSIRQDS TALKGDPAAV IPVTSNNRAT
LSYVN
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