Gene PHATRDRAFT_48917 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_48917 
Symbol 
ID7195210 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011688 
Strand- 
Start bp25857 
End bp26581 
Gene Length725 bp 
Protein Length210 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002183656 
Protein GI219126839 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.164751 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCCAC AATTTGCTGC ATCACTCGGA TGGGTTCTGA TATTACTATT CGTGAAAGCA 
AGGATAGTAT ACGCTTGGCT TCCACACACT AGCTTTCACA CCCGCTGTTC TGGCTCCCCG 
CGAGCGTGGA TTCCGTCGAT CACATCGCTG TATTCCGACG CCTCCATTTC CTCCGGCACA 
CCACAGGCTT TAAAGGAGGA TAGCGATGAG TACGAATATG TGGAGTATGA TATCCTCCGA 
GAGGAAGATT TTGCAAAATC GGAGTGGCTC ATTGGTACAA ATTGGGAGAA CCGCCAAAAT 
AAAATCGAAG AGACGTGGGT TCGCCTCGCA ATTACCGAAG ATGGTAAGAA TCTGGCCGTT 
TGGGGTGACA AGTCCGAAGG CAAGTGGAAT CTCGATGCGG CGTCGCAGTT TCTGTCAATC 
AGTAAGGAAA ATATATTTGG TAAACGCATT TGGGCAGGAT CCGTGGATGA TTATTACTAT 
GTCCAAGGTA CTGTACGTGG TTGGACCTAT TGGAGCGCAG CCGAAATTTT GGGACAGTGG 
CAGGCCAAGC GTTTGGGCGT TGACCCTGAA GAAGCCGGTG AGGCTCCCTG GTTTGAAGAC 
GATGGACAAC CACCAATTGA GGGACCCAAT TAATTGGAAA CTGCCATTCT TCCTACTAGT 
GCGATTTGCC GACATTCATA TTTCAAGCAA TTTAATCCCT GACGACAAAC ATGGATATGT 
TTATG
 
Protein sequence
MSPQFAASLG WVLILLFVKA RIVYAWLPHT SFHTRCSGSP RAWIPSITSL YSDASISSGT 
PQALKEDSDE YEYVEYDILR EEDFAKSEWL IGTNWENRQN KIEETWVRLA ITEDGKNLAV 
WGDKSEGKWN LDAASQFLSI SKENIFGKRI WAGSVDDYYY VQGTVRGWTY WSAAEILGQW 
QAKRLGVDPE EAGEAPWFED DGQPPIEGPN