Gene PHATRDRAFT_4402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_4402 
Symbol 
ID7195228 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011688 
Strand
Start bp104195 
End bp105109 
Gene Length915 bp 
Protein Length274 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002183674 
Protein GI219126877 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CCGCTCTTGG TGGGATTGCT GGCGAATAAG GATCCGGCTG CGAAAAAGTA TGCCGAATGG 
ACTGGCAAGG CGTGCCGGGC CGACGGACTC CGCTACGAGC TACGCGTACT GGATGACCCC
ATTGATGTCG AAGCAGCGTT AATGGACGCG AATGACGACC CGCGTGTACA CGGAATTATC
GTCTACTATC CCATCTTTGG TCAAGAGGAA TCCTTTTCTG GTGCAAGCCA GGATGACTAC
CTACGAGACT CCGTCAGTTT CAAATGTGAC GTCGAAGGCT TGTGTCATAC GTACCGAACG
AATCTTTACC GCAACGTTCG GTACTTGGAT TACCCGAGCA ATACAGAAAA GTGTTTGCTA
CCCTGCACGG CTCTATCTGT TGTAAAGATT CTGGAGGAGT GTCCCGGATG CTACGACATG
ACGAGGCCTC TGGGCAAGCG CAACGAAGGA AAAACCATCA CGGTCATCAA CCGTTCTGAA
ATTGTAGGCC GTCCTTTGGC TGCCATGCTC TCCAATGATG GAGCAGACGT TTATTCGGTA
GATGTCAACT CAATCTATTT GTTTACGGGT GGACGATTGC ATAAAGTAGA CGAAACACCC
GAGTCTTGTG TTCGAAAGGT GCGTCTTTGT TGAACTCATT TGTTGATAAG ATTTGCTTGT
ATGATGATGC CTCACCAATT TTTTCTCATC CTTTACGACT TGATATTGCA GTCCTCCGTT
ATTATCACGG GAGTGCCAAC GAAGTCCTAT CGACTTCCAA CGGAATGGAT CCAGGAACAT
ACGACGGTAG TAAACGTTTC GTCATTCAAG AATGTGGACG AAGAGGCTCT CTTAAAGATT
CCTGGGGTGG TCTACGTCCC ACTGGTCGGA AAAGTCACGG TTGCCATGTT GGAAAGAAAT
TTAATGCGAT TGTAC
 
Protein sequence
PLLVGLLANK DPAAKKYAEW TGKACRADGL RYELRVLDDP IDVEAALMDA NDDPRVHGII 
VYYPIFGQEE SFSGASQDDY LRDSVSFKCD VEGLCHTYRT NLYRNVRYLD YPSNTEKCLL
PCTALSVVKI LEECPGCYDM TRPLGKRNEG KTITVINRSE IVGRPLAAML SNDGADVYSV
DVNSIYLFTG GRLHKVDETP ESCVRKSSVI ITGVPTKSYR LPTEWIQEHT TVVNVSSFKN
VDEEALLKIP GVVYVPLVGK VTVAMLERNL MRLY