Gene PHATRDRAFT_39766 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_39766 
Symbol 
ID7195202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011688 
Strand+ 
Start bp657276 
End bp657812 
Gene Length537 bp 
Protein Length178 aa 
Translation table 
GC content63% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002183648 
Protein GI219126823 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0997389 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCCGAG GAAAGCGCAA AGCGACGTCC AAATCCCGGC CCGTCGCGAC GACGAAACGG 
GTCAAGGCAC CCGCGCCCCG TCGGGCGTCC CGCCGTGCCA CGATCGCGCC GCGGTACGCC 
GACGATACGG CGTCGTCCGC TACGGAGGCG TCGCAAACTT CCGAGGGCAG CCACAACGAG 
GTCGTTGCCG AACGTCCACT GACGAGTAAG CGTGGAACGA AACAACAAAA GGGCGTTCTT 
CCTACCAAAA TCCACCAGAC AAAAGGCCGC AACCCGAAAC CCGAACGTGC ATCCCGGAGT 
GTCCGCTCGT CTCGGAATAA CCCGGATTCC ACTACCGACG CGTCGAGTGA TGGCCACAAT 
CCGGGATACC GCCAGGTCAT GCGAAGCCCC GGCGACGATA CATCGTCTGC GCGTAGTCGT 
CCCGTATCAT CGCCGCTCCG CCCGGTCTCG ATGGCATTGG CCCTGGAACG TCGTCGTGCC 
TGGCAGCAGG AAACAACACC TTCGGATTGG CGAGTCACCA CTGCCATGGA CTACTGA
 
Protein sequence
MPRGKRKATS KSRPVATTKR VKAPAPRRAS RRATIAPRYA DDTASSATEA SQTSEGSHNE 
VVAERPLTSK RGTKQQKGVL PTKIHQTKGR NPKPERASRS VRSSRNNPDS TTDASSDGHN 
PGYRQVMRSP GDDTSSARSR PVSSPLRPVS MALALERRRA WQQETTPSDW RVTTAMDY