| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_39734 |
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| Symbol | |
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| ID | 7195449 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011688 |
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| Strand | + |
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| Start bp | 571369 |
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| End bp | 574427 |
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| Gene Length | 3059 bp |
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| Protein Length | 829 aa |
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| Translation table | |
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| GC content | 58% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002183635 |
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| Protein GI | 219126796 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTACC AACGGTGGCG CGATACGGAC GGTGACGATT CCCGGAGTCG CAAGAGTCAA
CGCAAACGAC AATCCCGGGG CACCAATTCG TACCAACGTC CCTGGAACGT GGAAGACGAC
GACGACAACA ACAATAATAA TGGAAGTAAT CGTCGACGCA GTACCCAGTC GACGTCGTCG
TCGAGATCTC AAAGTCGTCG GAGTTCAACG ACGCCATCCC ACACCCAAAC GACCAAGAGT
CGATCCTCCC GTTCCGCCTC GTACACATCT CCCGCAATCA CCACCACGAC GCGAGTCCGC
AATCGACGAT CCTCGCACGG TCCCGTCGGA CCCTCGACGA CTCCCGTATC GGTGGACATT
GACGTTTCGG ACGATGACGA CGATCACGAC CATTACCGCA ACGTGGACTC GGCGCGGGGC
TCCCATGGGG CGGCGTACCC CGCACGGTCG ACACCGTCGC CCAGTGCCGA ATCTACCACT
TCGGCGGCCT CGTTCCGGAC TTCGGCCGCG CTGGAAAATC GGACCGCCCG ACACTATCGG
CGACGCACCC CGTCGCCGCA GGCGGTCGTG TCGGGCGGTC CGGAAGCGAT GGGGTCCACC
CAACGCGTGT CGCTCACTTC CAGACAGTAC GAAGAACGAC GTCGACAAGA ACAAATACAA
GCCGCCCAAC TAGCCGCGCA AGAACAATTG CAAGCCGCCG CCCTGGCGCA ACAGCAGCAA
CTACAACAAC AACGGCAACT ACAACAACAA CGGCAACTAC AAGAACAACG GCAACTACAG
GAACAACGGC AACTACAAGA ACAACGGCAA CTACAGGAAC AGCGGCGACT ACAGGAACAA
CGGCATCAAC AAGAAGAACG GCAACGGCTA CTGAAGCAAC AGCAAATGCA ACAGCAGTTG
CAAAAAATAC AACAGCAGCA AGAAATTGTG CGACAACGAC AAAAAGAAGC TGCCGCGGCC
GCTGCGCAAC TCCAATCGTC ATCCCGTGAA CCCACCGCAT TCGTACTCGG ACCCGGCGGA
ACTTTACCGC CGCCCCCGCC TCCACCACCA CGTACCAGCC CCCCGGGATC GATCTCGCGG
GAACTAAGGA ACCGCCGATT GGCATCCCAA CGACCATCGT CTCCTGTCGC GATCCGTCCC
GCCGTACCGC TTCCCGTACA GGCTGCTGCG TCCATACCAC CCCGTCCGCA CAACCCACCC
CAGGTACCCG CAGTCGAATC GGCTCCAAAA ACACCCTCCC CGCAAGCGGT TGCGGTCGAC
TCACGTCGCG GTGGCGCTGC CTTCTTCAAA CGCACCGCCC CCGTCCCCAT CGACGCCGAA
GATTCCGCCC GACTCCTACA GCTCGAACGC GAGGCCCGCG AAAATGAGCT CGCCAAATTG
CGCCAAGCCC GTTGGGTGCG GGATAACGAA CGGGAACAAA CTCGTTCCGC CGCAGCACGG
ATCGAGGATC CACCCCTCAC ACAATCATCC CACCCACCTA CCAGTCGCAT CGTACCGTCG
GTGATTCCAC TCGACCCCAA TCCTACCGTT GTTGCGGAAT CGTCCCGTCG TGGGCACACC
GATGACGTAC AACCATCGAC CATTCCCGCG GCGGTAATCG CGTCCCCACG GAAGGCGGTG
GTTCGTCCGG ACCCCGAACC CCGGGAGAAA GTCGATCGTC CCGTCCCTCG ACGGTCCACT
TCGCGTCCCG TAACGCCACC ACCGGGTCCA ACGTCGGACG ATGTCTCCGA CGTCGGTAGT
GCCGCGAGCG ACGTGGGGCG GTATTTGGCC CAGCGCAAGT CATCATCATC CCCCAATCCT
GCCTTTTTGG CATCCCGCGC TGCCTTTGCG GGGAAGACTT TAACGACGAA CGGGACTCGG
CCAATGAGAA ATGCGTTGCC GCTGGCGGCC GATAACGAAG CCTCTGACGG CAACGAGTCG
GACGATTCGG AAGAAACCAC CACGGAAGAG GAATCCAGTA GCGACGAAGA CCCGGACGTG
CCGGAATGGA GTGTACGAGT GTGTGTCGTA TCGGCAATAG ACTTGCCCGC CAACGTTGTA
CCCAATCTAC CCTTTAGTCC CGTTTTTGAT ATTGGTTTGG TTCGATTTCC AGGCCCCGAC
GTGGACTCCC GGATCCAACT ACCTGGTGAC GACGCCAGTC GACAAAACCT GAGTGCCTTG
CTGACTAAAG GAGGCTTGCA CTCTGTACCA CGGTCGCGTG TCCAGTGTAC CAATTTGAAA
ACTCTCAGTC AACGAGACAA CGGATCGGTC GAATTTCACG AAGAACTGCG GTGGGACCGT
GTCAAGTACC CGGAAGAGCT GGCGCTGGCA ATCCAGCTCT CCGCTAAAGC GGTGATTGCT
CCGGCAAACA TCAAGGAAAA CCCACCAATG CAAAAAGTCC AACCACTCCA GTTTGGTAAC
CCGTCGGCAC AAAACGGAAC GGGGTGGAAC TCCGCGGGTA AGACCAGCTC CGGTAGTAGC
AGCGAGGCAG GGGGGTCTCT CTTTCGGCGC ACCCAAAAAA GCTCGGCCGA AATGGAAACC
GCCAATGCGG CTGCAGCCGT GGCCCAGCTT TTGGTGACGG GTGAAAAATC GAAAGCGGAC
GACGAAGGGC GTCTGTTCGA CTCGAAGGCG GCAAATTCAA AAGCCGTGTC GGGCAATCGG
AGTGAACTGA ACGTAAAGCT CAAGCATCGC AAGCGACGTC GAAAGCCAAA ATTAACCGAC
GACTTGCGCC TCGGTTCCCA GATAGTCCCG CTCACCGCGT TACCACTGCG GAAAGCCTAC
GGCCAGGAGC ACGAGGCAAG AATCGAACAG TGGTTTGAGC TCGATGGTGC GAGCGACGTA
ACACCTACGA CACCGTCGCC AGCCAGCTCT CCCGCGAGAG GCAATCGGCG AAATCCTAGC
ATATTATTGG AAATCACGTT TTCTGCACCG GAAGTACTGG ACGACAGTGA GGACGAACTG
GATGATAATA TAAACTCCCC TCGGACCAGT CTGAATGCAT CATTTTCCAA AAGAGAGTCT
ATTAAAATTC GGAACCAACT TAAACAACAG GTTGTTGTCA AGGCGAAGGA GAAGGTTGA
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| Protein sequence | MNYQRWRDTD GDDSRSRKSQ RKRQSRGTNS YQRPWNVEDD DDNNNNNGSN RRRSTQSTSS
SRSQSRRSST TPSHTQTTKS RSSRSASYTS PAITTTTRVR NRRSSHGPVG PSTTPVSVDI
DVSDDDDDHD HYRNVDSARG SHGAAYPARS TPSPSAESTT SAASFRTSAA LENRTARHYR
RRTPSPQAVV SGGPEAMGPP GSISRELRNR RLASQRPSSP VAIRPAVPLP VQAAASIPPR
PHNPPQVPAV ESAPKTPSPQ AVAVDSRRGG AAFFKRTAPV PIDAEDSARL LQLEREAREN
ELAKLRQARW VRDNEREQTR SAAARIEDPP LTQSSHPPTS RIVPSVIPLD PNPTVVAESS
RRGHTDDVQP STIPAAVIAS PRKAVVRPDP EPREKVDRPV PRRSTSRPVT PPPGPTSDDV
SDVGSAASDV GRYLAQRKSS SSPNPAFLAS RAAFAGKTLT TNGTRPMRNA LPLAADNEAS
DGNESDDSEE TTTEEESSSD EDPDVPEWSV RVCVVSAIDL PANVVPNLPF SPVFDIGLVR
FPGPDVDSRI QLPGDDASRQ NLSALLTKGG LHSVPRSRVQ CTNLKTLSQR DNGSVEFHEE
LRWDRVKYPE ELALAIQLSA KAVIAPANIK ENPPMQKVQP LQFGNPSAQN GTGWNSAGKT
SSGSSSEAGG SLFRRTQKSS AEMETANAAA AVAQLLVTGE KSKADDEGRL FDSKAANSKA
VSGNRSELNV KLKHRKRRRK PKLTDDLRLG SQIVPLTALP LRKAYGQEHE ARIEQWFELD
GASDVTPTTP SPASSPARGN RRNPSILLEI TFSAPEVLDD SCCQGEGEG
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