Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_39728 |
Symbol | |
ID | 7195446 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011688 |
Strand | + |
Start bp | 556263 |
End bp | 557045 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | |
GC content | 47% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002183632 |
Protein GI | 219126790 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGGTCG CTGTGCGTTG TGCTTTCTGG CAGGCTATCG GAGCTGCTTT GATATTAATG CTTTCCCATT GCATTTGCGT GGGAATAGTA ATGTACTTTG ATTTTTCAGG AAAGTGGGAA GCCTACGAAT TGAGTAAAAG CCGATCGAAG AGCCTGTCGG ATCGAATGTA TGACTATCAA ATTGGCATTC GCAAATTCTG CTTGGATCTT GTATTACTCT TCGTCCCTTG CATCGCCTTT TGCTTCTGGT GCAAAGGCGA CAAAATAGCC CATTCTCCGG ACTCTATGTT CTTGTCGTTT GTCAAACTCT TAACGGGCTA CGCGCTGGGG AAAATTTGGG CCTTCCTGGT ACATTACGGT CTACATTTTC CACTATTCTA CCAATTTCAT AGAAGGCACC ATCGAAATCC CAAGAATCTC GTAGCAAGCG CCGCCTGGGA TGACAGTTTT GTCGAATACG CTATTATGGA AATACCGTCC TTCGCTATTA CACTGTTGCT CTTTCCGACC CATTACTATT GGCATTTGAT TCACTTTGCT TGGCATGGTT GGGATGGTGC GTGTGGACAC AGCGGATTTG CGGCCCCTGG GCTACTCGGC GCGTGCTTCA ATGGTGAATA TCACTACCAC CATCATGCAC TTTTGACCGT CAACTACGCC GAGCTCGAAT TTCTGGACAA GCTCTGCGGA ACGCATCATT CGCAACGTTC CGTCGGAGTC AATAAGCAAA CGTTGTCATC GACTAGGAGC CAACAGAAGA CGAACAATCG TATACTTAAC TAA
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Protein sequence | MSVAVRCAFW QAIGAALILM LSHCICVGIV MYFDFSGKWE AYELSKSRSK SLSDRMYDYQ IGIRKFCLDL VLLFVPCIAF CFWCKGDKIA HSPDSMFLSF VKLLTGYALG KIWAFLVHYG LHFPLFYQFH RRHHRNPKNL VASAAWDDSF VEYAIMEIPS FAITLLLFPT HYYWHLIHFA WHGWDGACGH SGFAAPGLLG ACFNGEYHYH HHALLTVNYA ELEFLDKLCG THHSQRSVGV NKQTLSSTRS QQKTNNRILN
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