Gene PHATRDRAFT_39728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_39728 
Symbol 
ID7195446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011688 
Strand
Start bp556263 
End bp557045 
Gene Length783 bp 
Protein Length260 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002183632 
Protein GI219126790 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGGTCG CTGTGCGTTG TGCTTTCTGG CAGGCTATCG GAGCTGCTTT GATATTAATG 
CTTTCCCATT GCATTTGCGT GGGAATAGTA ATGTACTTTG ATTTTTCAGG AAAGTGGGAA
GCCTACGAAT TGAGTAAAAG CCGATCGAAG AGCCTGTCGG ATCGAATGTA TGACTATCAA
ATTGGCATTC GCAAATTCTG CTTGGATCTT GTATTACTCT TCGTCCCTTG CATCGCCTTT
TGCTTCTGGT GCAAAGGCGA CAAAATAGCC CATTCTCCGG ACTCTATGTT CTTGTCGTTT
GTCAAACTCT TAACGGGCTA CGCGCTGGGG AAAATTTGGG CCTTCCTGGT ACATTACGGT
CTACATTTTC CACTATTCTA CCAATTTCAT AGAAGGCACC ATCGAAATCC CAAGAATCTC
GTAGCAAGCG CCGCCTGGGA TGACAGTTTT GTCGAATACG CTATTATGGA AATACCGTCC
TTCGCTATTA CACTGTTGCT CTTTCCGACC CATTACTATT GGCATTTGAT TCACTTTGCT
TGGCATGGTT GGGATGGTGC GTGTGGACAC AGCGGATTTG CGGCCCCTGG GCTACTCGGC
GCGTGCTTCA ATGGTGAATA TCACTACCAC CATCATGCAC TTTTGACCGT CAACTACGCC
GAGCTCGAAT TTCTGGACAA GCTCTGCGGA ACGCATCATT CGCAACGTTC CGTCGGAGTC
AATAAGCAAA CGTTGTCATC GACTAGGAGC CAACAGAAGA CGAACAATCG TATACTTAAC
TAA
 
Protein sequence
MSVAVRCAFW QAIGAALILM LSHCICVGIV MYFDFSGKWE AYELSKSRSK SLSDRMYDYQ 
IGIRKFCLDL VLLFVPCIAF CFWCKGDKIA HSPDSMFLSF VKLLTGYALG KIWAFLVHYG
LHFPLFYQFH RRHHRNPKNL VASAAWDDSF VEYAIMEIPS FAITLLLFPT HYYWHLIHFA
WHGWDGACGH SGFAAPGLLG ACFNGEYHYH HHALLTVNYA ELEFLDKLCG THHSQRSVGV
NKQTLSSTRS QQKTNNRILN