Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_39719 |
Symbol | |
ID | 7195439 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011688 |
Strand | + |
Start bp | 539778 |
End bp | 540290 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | |
GC content | 47% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002183625 |
Protein GI | 219126775 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.117483 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTCTTA TTCACGTGAT TCCGGATGAT TCGACTCATC AAGCATCTTA TCAGACGGCT TCAAGTACCT TGACTGACCG GGGTACAAGC AGTCGCAAAC GTTCGTCAAC GGCGGACAAC ATTTTCCAGT CGTTCATACA CGCCGGGCAC ATAACAAGGA ACATAGGATC AAATGTTATT AAATGCGAGT CCGCGCTCGT TAACCAGCGT CTGGTTGCTG TGCAGGAAGT GCAACCTCAA TCGCCTGAGC TGCAACAACG CAGTAAACGA CGAAAACATC AACATGAGGA AATAGTTGAA GCTGAAGTAA TTACCACGAG AAAACCGCCA AAAGAACGTC AGATCGAGCG CAAGGAAGAG AACGATGCCA TAGAAAGGCA AGTGGCACGT GTCAAACGAA TGTCCATGTT GCTTCGAAGT CTGGAAGCGA CACATCAGCT CTTTCTCGAG GAAATGATTG CTTGCGCCCA AGATTACAGC GGTAAGAAAT TGGCGCCTCC AAGCTCAAAT TAA
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Protein sequence | MSLIHVIPDD STHQASYQTA SSTLTDRGTS SRKRSSTADN IFQSFIHAGH ITRNIGSNVI KCESALVNQR LVAVQEVQPQ SPELQQRSKR RKHQHEEIVE AEVITTRKPP KERQIERKEE NDAIERQVAR VKRMSMLLRS LEATHQLFLE EMIACAQDYS GKKLAPPSSN
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