Gene PHATRDRAFT_39719 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_39719 
Symbol 
ID7195439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011688 
Strand
Start bp539778 
End bp540290 
Gene Length513 bp 
Protein Length170 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002183625 
Protein GI219126775 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.117483 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTCTTA TTCACGTGAT TCCGGATGAT TCGACTCATC AAGCATCTTA TCAGACGGCT 
TCAAGTACCT TGACTGACCG GGGTACAAGC AGTCGCAAAC GTTCGTCAAC GGCGGACAAC
ATTTTCCAGT CGTTCATACA CGCCGGGCAC ATAACAAGGA ACATAGGATC AAATGTTATT
AAATGCGAGT CCGCGCTCGT TAACCAGCGT CTGGTTGCTG TGCAGGAAGT GCAACCTCAA
TCGCCTGAGC TGCAACAACG CAGTAAACGA CGAAAACATC AACATGAGGA AATAGTTGAA
GCTGAAGTAA TTACCACGAG AAAACCGCCA AAAGAACGTC AGATCGAGCG CAAGGAAGAG
AACGATGCCA TAGAAAGGCA AGTGGCACGT GTCAAACGAA TGTCCATGTT GCTTCGAAGT
CTGGAAGCGA CACATCAGCT CTTTCTCGAG GAAATGATTG CTTGCGCCCA AGATTACAGC
GGTAAGAAAT TGGCGCCTCC AAGCTCAAAT TAA
 
Protein sequence
MSLIHVIPDD STHQASYQTA SSTLTDRGTS SRKRSSTADN IFQSFIHAGH ITRNIGSNVI 
KCESALVNQR LVAVQEVQPQ SPELQQRSKR RKHQHEEIVE AEVITTRKPP KERQIERKEE
NDAIERQVAR VKRMSMLLRS LEATHQLFLE EMIACAQDYS GKKLAPPSSN