| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_39717 |
|---|
| Symbol | |
|---|
| ID | 7195320 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011688 |
|---|
| Strand | + |
|---|
| Start bp | 534860 |
|---|
| End bp | 535348 |
|---|
| Gene Length | 489 bp |
|---|
| Protein Length | 162 aa |
|---|
| Translation table | |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002183623 |
|---|
| Protein GI | 219126771 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.159289 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTCAAGC GCAAACACCG CTCTAATCTG GCGTCGGGCC TCCAAGGTTG TCAGCAAGTC
ACGAATTGCC ACCATCGAAC CATCCTCCGC TCAACCCAAA GCCTCGAATC CGCATGGCGG
ATACTCGGAA CGGACCCTTC CCAGTTTTAC TTTGGCCAAA GCCATACTCA CGGCGCTTTT
GGCAACGTCG GTAACGCCAG TGTCAGCTTT CTCGAGGACC ACGACGAGCA AGACTTGGTG
GACCAGAACG CTCTCGAGAT GGCCGTCTTC CGCCGATTCC GATTGGCGGC CAACACTTCC
GGGGCGGGAC AAATGGAAGA GGACGCCGCT CGGCATCGGG AACAGATTCT GACCTTGCGC
CAGCAACGCA AAATTTCTCC GACGACCGCC ACAACGATCA TGCGAGACCA TGCAATACAT
ATCTTGCCGG AAAACGTCGG CATCCGGCAC AAAGTTTTGG CGTTTAGTTT AAGTAGTCAG
AATACTTAA
|
|---|
| Protein sequence | MVKRKHRSNL ASGLQGCQQV TNCHHRTILR STQSLESAWR ILGTDPSQFY FGQSHTHGAF
GNVGNASVSF LEDHDEQDLV DQNALEMAVF RRFRLAANTS GAGQMEEDAA RHREQILTLR
QQRKISPTTA TTIMRDHAIH ILPENVGIRH KVLAFSLSSQ NT
|
|---|
| |