Gene PHATRDRAFT_39711 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_39711 
Symbol 
ID7195435 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011688 
Strand+ 
Start bp522845 
End bp523603 
Gene Length759 bp 
Protein Length252 aa 
Translation table 
GC content51% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002183621 
Protein GI219126767 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTTT ACGGCGTTCC ATTGTCCCCG CCGTTTCGGG CAGTGGCTTG GACGCTGCTA 
CAAAAAAACG TTCCCTTTAA AATCCAAATT ACAGTTCCGG GAGCTACCAA TAAAATCGGT 
TCCTTGCATG ACTCCTTTCT CTCCAAAACG AAATCTCGTA GCGGTACAGT ACCTGTGCTG 
GAAGAAGATG ATGGGATAAC TCTATCGGAG AGTCCGGCGA TTCTGACGTA TCTTTGCGAG 
AAGCACCAGT GGTCAGATTT GTATCCGAAC CAGCCCGGAA CCGCTCACAA GGCATTGATC 
GATTCCTACC TGCACTGGCA TCACGAGAAT ACCCGTCTGA TCGCAACGCT TACCATGCCC 
TATACCAGGC CTGATCTAAA CCGAACTTGT ACTCAAGAAC AAGAGTCGGG GGTACAATCC 
GTGCTCGAAT CACTTGATCA AGGCTGGTTG GCGAACGATG CTTACATTGG GGGCAGCGAC 
CAGGCTTCAG TTGCCGACCT TTTGGCTTAT GAGGAAATTG CGCAAGCTTC TATGACGGGC 
GTTTTGGATG AGACTATTTC CCACTCCCAC CCCAACTTAC AGGCCTGGAT GAATAGAATG 
GAGGCGTTGC CCTTTCACGA TGCGGCTCAC GCGTCACTCG TTGCACTGGG AAACCTCAAA 
GAACCGGCGG ACGATACTCC CATGATGAAG CGACTGGGCG CAGCTACAAA AGAAGGGATG 
AAAGCTTTGC AAGACGCGCA ACAGACATAT GTTTCTTAG
 
Protein sequence
MKLYGVPLSP PFRAVAWTLL QKNVPFKIQI TVPGATNKIG SLHDSFLSKT KSRSGTVPVL 
EEDDGITLSE SPAILTYLCE KHQWSDLYPN QPGTAHKALI DSYLHWHHEN TRLIATLTMP 
YTRPDLNRTC TQEQESGVQS VLESLDQGWL ANDAYIGGSD QASVADLLAY EEIAQASMTG 
VLDETISHSH PNLQAWMNRM EALPFHDAAH ASLVALGNLK EPADDTPMMK RLGAATKEGM 
KALQDAQQTY VS