Gene PHATRDRAFT_39687 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_39687 
Symbol 
ID7195304 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011688 
Strand
Start bp450247 
End bp450769 
Gene Length523 bp 
Protein Length118 aa 
Translation table 
GC content51% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002183612 
Protein GI219126748 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAAGTG ATCCTCTGTG ATCCGCCTAC CCGGTCACTT GCTGCAAAGC AAGATTGGTC 
CGGGGGCCAA ACTGGAATGG AGTTTCTCCT CCCCCACACG GAATGTTTCG GATCGACCTT
TTTGTACTGA CTTTTTGTTT GTTCGTGTGC TGGACTCGGG CAACTACAGG TCAAGGGTAA
GAAATCCATC GTCAAATTCG TCATTGACTG CACGCAACCC GTGGACGACA AAGTCCTGGA
CGTGGCGCAG TTCGAAAAGT ACCTACACGA TCGACTCAAG ATTGGGGGTA AAACTGGACA
GCTCGCCACC AGCGGCGTGG TGCTCAGTCG GGATCGTACC AAGCTTACCG TCGCCAGTCC
GGCCGAACTC GGTTTTTCCA AGCGACAACT CAAGTACCTT TCCAAGCGGT ATTTGAAAAA
ACAGCAACTG AAGAATTACA TGCGTGTGGT GGCGGCATCC AAAAATTCTT ACGAAATGCG
GTACTACGCC ATTAGTGGAG GAGACGGCGA CGATGAAGAA TAA
 
Protein sequence
MVKGKKSIVK FVIDCTQPVD DKVLDVAQFE KYLHDRLKIG GKTGQLATSG VVLSRDRTKL 
TVASPAELGF SKRQLKYLSK RYLKKQQLKN YMRVVAASKN SYEMRYYAIS GGDGDDEE