| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_39667 |
|---|
| Symbol | |
|---|
| ID | 7195417 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011688 |
|---|
| Strand | - |
|---|
| Start bp | 407653 |
|---|
| End bp | 408830 |
|---|
| Gene Length | 1178 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002183739 |
|---|
| Protein GI | 219127013 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGGGT TCCAGGCACG GTTGCCTACC CAGACGGAGA TTGAGACTTG CATTCACGTC
GAACTCACTG CACAGGACGC TTGGGATCCT AGTTCGGACA AACTAGAGCA ACAAGAGCGT
TTGAAAGAGA CTCGGTTGTC CAACATAGCT GGCACCGTGT CTACGTTATT TCCCGATCGA
AAATCTGAGA TCTCGGCAGT TCTATCGTCG GTCAGCTCTA CACTGGTTGA TGACGACTTC
GTTCAAGGAA TGGAGCAGTC TGTTTGGATC ACATCGGCTG TGGCTAGTAG TACTGTGCGT
ACCAAGTCGC GGCACTCAAC GATGGAACCG ATGGAGTTAT CGCGTCGTTG GGGCATTGGC
CTCTCGACGG CACAGAAAAC TTTGAGAGTG ACAACCCAGA AAGGTTTGCG GACTGCTGTC
CACCCGTTGC ATCGCCGGTA CCGCACGCAA CAGCAGCAGC TTCGTTACAA TCGTCTGAAC
TCCAAATTTT ACTCTGACAC CATGTTTTCT TCATCGGTTT CTGTGCGAGG CAATACTTGT
GGGCAAATCT TTGTGAATGA TTTGAACTAT AGTAAGTTTA TACCATTGAA GAGCAAGGGT
GACGCTGGAT TGGCATTGGA GGAATTATTT CAGGATGTCG GTGTGCCAAC GCATATGCAC
ACTGACGGAG CGAAAGAGCT CACTACCGGG CACTGGCGGA AAGTTTGTCA GAGCTACGGT
CCGGTGAAAC AGACAGTGTC TGAACCACTG ACCCCGTGGC AAAACAGGGC GGAAGCGGAA
ATCCGGGAAC TGAAGAAGCA GGTGCTTTGG ATCATGTCCC ACGAGGGAAT TCCGCGACGA
TTTTGGGATT ACGTGGCCGA GTACGTCTCG GAGATTCGAT CTCGGACCGC ACACCCTCTG
TATGATTTGA AAGGTAGGAC GCCCATTGAG CACGTTACCG GGGAGACTCC AGATATCACA
GAGTGGCTCG AGTATAGGAT GTACCAGCCT GTGTGGTATC TGGACCCTGG GGACTTTCCG
GAGGAAAAGA AATTGCTTGG CCGGTGGTTG GGTCCTGCTC ACAGAGTTGG ACAGGCATTA
TGTTGCTGGA TTGTTCCCCA GTCGGGACGA GTAATTGCAC GGTCTACAGT GCAGCCAGTT
TCAGAGGAGG AGCGTGGATT GGACAGCTTC AAGACTAG
|
|---|
| Protein sequence | MSGFQARLPT QTEIETCIHV ELTAQDAWDP SSDKLEQQER LKETRLSNIA GTVSTLFPDR
KSEISAVLSS VSSTLVDDDF VQGMEQSVWI TSAVASSTTV SEPLTPWQNR AEAEIRELKK
QVLWIMSHEG IPRRFWDYVA EYVSEIRSRT AHPLYDLKGR TPIEHVTGET PDITEWLEYR
MYQPVWYLDP GDFPEEKKLL GRWLGPAHRV GQALCCWIVP QSGRVIARGG AWIGQLQD
|
|---|
| |