Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_39667 |
Symbol | |
ID | 7195417 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011688 |
Strand | - |
Start bp | 407653 |
End bp | 408830 |
Gene Length | 1178 bp |
Protein Length | 238 aa |
Translation table | |
GC content | 52% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002183739 |
Protein GI | 219127013 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGGGT TCCAGGCACG GTTGCCTACC CAGACGGAGA TTGAGACTTG CATTCACGTC GAACTCACTG CACAGGACGC TTGGGATCCT AGTTCGGACA AACTAGAGCA ACAAGAGCGT TTGAAAGAGA CTCGGTTGTC CAACATAGCT GGCACCGTGT CTACGTTATT TCCCGATCGA AAATCTGAGA TCTCGGCAGT TCTATCGTCG GTCAGCTCTA CACTGGTTGA TGACGACTTC GTTCAAGGAA TGGAGCAGTC TGTTTGGATC ACATCGGCTG TGGCTAGTAG TACTGTGCGT ACCAAGTCGC GGCACTCAAC GATGGAACCG ATGGAGTTAT CGCGTCGTTG GGGCATTGGC CTCTCGACGG CACAGAAAAC TTTGAGAGTG ACAACCCAGA AAGGTTTGCG GACTGCTGTC CACCCGTTGC ATCGCCGGTA CCGCACGCAA CAGCAGCAGC TTCGTTACAA TCGTCTGAAC TCCAAATTTT ACTCTGACAC CATGTTTTCT TCATCGGTTT CTGTGCGAGG CAATACTTGT GGGCAAATCT TTGTGAATGA TTTGAACTAT AGTAAGTTTA TACCATTGAA GAGCAAGGGT GACGCTGGAT TGGCATTGGA GGAATTATTT CAGGATGTCG GTGTGCCAAC GCATATGCAC ACTGACGGAG CGAAAGAGCT CACTACCGGG CACTGGCGGA AAGTTTGTCA GAGCTACGGT CCGGTGAAAC AGACAGTGTC TGAACCACTG ACCCCGTGGC AAAACAGGGC GGAAGCGGAA ATCCGGGAAC TGAAGAAGCA GGTGCTTTGG ATCATGTCCC ACGAGGGAAT TCCGCGACGA TTTTGGGATT ACGTGGCCGA GTACGTCTCG GAGATTCGAT CTCGGACCGC ACACCCTCTG TATGATTTGA AAGGTAGGAC GCCCATTGAG CACGTTACCG GGGAGACTCC AGATATCACA GAGTGGCTCG AGTATAGGAT GTACCAGCCT GTGTGGTATC TGGACCCTGG GGACTTTCCG GAGGAAAAGA AATTGCTTGG CCGGTGGTTG GGTCCTGCTC ACAGAGTTGG ACAGGCATTA TGTTGCTGGA TTGTTCCCCA GTCGGGACGA GTAATTGCAC GGTCTACAGT GCAGCCAGTT TCAGAGGAGG AGCGTGGATT GGACAGCTTC AAGACTAG
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Protein sequence | MSGFQARLPT QTEIETCIHV ELTAQDAWDP SSDKLEQQER LKETRLSNIA GTVSTLFPDR KSEISAVLSS VSSTLVDDDF VQGMEQSVWI TSAVASSTTV SEPLTPWQNR AEAEIRELKK QVLWIMSHEG IPRRFWDYVA EYVSEIRSRT AHPLYDLKGR TPIEHVTGET PDITEWLEYR MYQPVWYLDP GDFPEEKKLL GRWLGPAHRV GQALCCWIVP QSGRVIARGG AWIGQLQD
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