Gene PHATRDRAFT_39646 details

Gene Information

• Locus tag: PHATRDRAFT_39646
• ID: 7195282
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011688
• Strand: +
• Start bp: 340991
• End bp: 341765
• Gene Length: 775 bp
• Protein Length: 239 aa
• GC content: 53%
• Product: predicted protein
• Protein accession: XP_002183593
• Protein GI: 219126709

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTTGATG ATCGTGGCAG TTGTGGCTTG ACTACCAAAG CTGGTTCCGT TCCTTATAAT 
GCGCAAGCCA TTGCAACGAA GACTTCGTAC TTTTGTGCGA TTCTCCAAAT AGAAACTTGC 
CCCGTGAATT TCGTTCGGAA CTCCGGCACT CGTGATGTTT GTCCATCGGT ACGCTTTTGG 
ATTTGGTTCG TGGATGGTGG TGATGTGACA TCGATACTCC CAGAGATCGC TTAACGTAAA 
TTCGTCGACA TTTTCTACCT ATGTGCACAA ATGCCGTGAT TTTGCCGAGT ACCGTTCTCC 
AAACCGCCGT TGTGTATTTT TCGCACGCCA GTCAAGTCGT GTTCCAAACC AGAGCGAAAA 
AGTCGGAGTT TCCGCATGCG TTCCCGTTCT TCTCGGAAGC AGGGAATCCG CGAGAGCGCC 
GGCCCGCCTA CGTGTGTTGC CCGTGACCGA GCGTTTTCAC CGGACCGTAC CGCCCGTTGG 
CACCCGACGA TGGAAGGCCC AGAACTCGCG AGCCCTTACT CTAGTACGAG TCGTGGGGTC 
GTGGCGCGTT CCCTCGAATT GCCCGTTTGC CCCCTTCCTC CTCCTTTTTT CATTCCCTCC 
CAAGCATCCG CAGTATCGGT CACATAATCC GCACACCAGT CACCAGTACG ATTGCGAGTA 
CTTCGGCAGG GCTTGTAACA CCGAGTATCC TACCGACCCC GCATCCGCGA GCGATCTCTC 
GGCTAGCAAT AGAAGCACGG TCGGAACTCG AAAACAAAAG GCGATTGTTT TTTGA 

 

Protein sequence

MLDDRGSCGL TTKAGSVPYN AQAIATKTSY FCAILQIETC PVNFVRNSGT RDVCPSRSLN 
VNSSTFSTYV HKCRDFAEYR SPNRRCVFFA RQSSRVPNQS EKVGVSACVP VLLGSRESAR 
APARLRVLPV TERFHRTVPP VGTRRWKAQN SRALTLVRVV GSWRVPSNCP FAPFLLLFSF 
PPKHPQYRSH NPHTSHQYDC EYFGRACNTE YPTDPASASD LSASNRSTVG TRKQKAIVF