Gene PHATRDRAFT_39605 details

Gene Information

• Locus tag: PHATRDRAFT_39605
• ID: 7195261
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011688
• Strand: +
• Start bp: 245918
• End bp: 249422
• Gene Length: 3505 bp
• Protein Length: 1062 aa
• GC content: 51%
• Product: predicted protein
• Protein accession: XP_002183575
• Protein GI: 219126671

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.608294
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACCAA CCAATACGGA AGAGGAGCGA CAGCGGCCTC CCACGCATCC CAAAAGCACG 
ACGGTAGCGC CCGAGTCGCG GGATGCGGGG ACGAATTACA CGAGCGGCGT CCCGAACGCA 
ACCTCGGCGG CGGACCCCTC TTCCAACGCC TCGACGTACC CTCCACCACC GCCTCCACCG 
TATCCGTTCG CGGTGGAAGA ACGGGCCGGA CGGGGCGTCC TGTCGTCCGT GGAAAAACGA 
CGACAGCACG TTCGGACCGC CTCGGGAGAG CAATGGCACG CGGCTGTGCC CGGCGAACGA 
CCGCCTCTCG GAGGCAACGT ACCCTTTCAA CGAATGTACA ACAGTATGGC GACACCGCCG 
GCTCCCATGA GTAGGACGTC CAGTACGGCG TCGAGTACGG ACGAAGCCAA ATCGGCTAGG 
CAAAAGTTCC AGGACATTGC TCGGAAGGTC CGAATGTTGA ATCTCGTCGC TCCGGGCAAC 
GCCCACACCA ACCACGGATT GACCAGTCCG AACGGCAGTA CGTCGGGGGG ATCACGGGGA 
CACCGGAAAA CGGCCAGCCG TGCGCACGCG TTACTGGACA GTATCCAAGA AGCAACGGAA 
GATGACGAGT CGAGGTCCAA CTGCGGGAAC GTCTTCTTTG AAGGCGTCGG AGGGGACGCG 
CTCACGCAGG GCGAATCTCA CTTCTCGGTG GAAGCCACGG ATGCCGATCG ACTCGTCGCC 
GGCGCGATAC AGGTGGAAAA ACTCTTCGCC ACGAATGATA CGGGGTCGAC GAGCTCGACG 
GAAGAACTCC AAGATGCGGA CCACGACGGC GGCGCGTTGC CCGATTACGA AGAACAAGTG 
CCCTTGCGGG ATCATAATGA AAGATACGGA TCCCTGGATG AGTTTAGCAA CGGCGGTTCG 
AAGTATCCAC GCCGGGTCGT TAAAAAACGT ACGGACCGGT ATTCTTCAAA ACGCCTGCTT 
CGTCGCATTG CGAAAATGTG TCACCCATTC ACTTTGCTGC AAGCCTTGTG GCATACTATC 
CTGCATTCCT ATTTCGTCAC ACTAAGCCTA CCGGCGTTTG TTGCAGCGTG GGTGGTCTAC 
TATCATCTCG GCAACCCCAA TTTGGAGTTT ATGCCCGGGC ACGCATCGGT GGCGTGGTGG 
CTAATCTTTG TTGGGCGTCA GTGTATCACG TTGGAATTGG CGCGTCTTAC CCAATGGTTA 
CTCGTGGACA AAATCATCCT CGGTACCCGG GTGGCCGTCA AGTGTTTGGG ACCGTTGCCG 
ACATTGTACG CCATTCAGGC CAAGGGTTGG CCAATTATGT TGGCCTTATG GGCCATTGCC 
GACCTTTTCT TGCTGCACGG AGACAATCGC TTCCAACAGC ACTGGTTCTA CTTTACCGGT 
ATTTCCATTT TCAAAGACGC CAATTCGGGG GTGTACATTT TAACTTCCCC AACCTACTTG 
CGCATGTTGC TTAGTATGCT GGTGGCAGGT CTCGCGACCG CGGGCAAGCG GACTGCCGTG 
GCCATGTACT TTGGACGTCG TACGTTTTCC GAATTCAAAC CTCGACTGGA AAAGATTTTG 
CGAGAAGTAG TGTTGCTTTC CGAAACTGCC GAGCTTGCTC AAGAAGCGGA ACGGGTATCC 
TACGGGGTTG GACAGACCGG GGAAACTTTG GAAATCGATT TGAATCGTCA AGATAGTCGA 
GTGCAATTCA TGGACGACGT TTCGTGGACC ACTGATCGAA ATTTGGTGAA GAATTCAGGA 
CGGGGAAACG CTATGGATGA ATCGAGCGAC GATGAGAGCG AAGATAGACA CAGTCCAGCA 
AATTTGAAAA GAAGAAGGAG CGAATCACTG AACGACGCAA TGATGGAAAA GACCGAGAGT 
GGCAGCTTTC GAGTGAGCGA CTTGCTCGAA AATTGGGAAG AGCCAGTGAA CAAACTCGAC 
AAGGTACGGT TATTTTTTGT TTGAGTATCA TTCTTTGTTT TAATCCTTAT ATACTTACAT 
CTTTCGAATT CGTATATAGT CTTTGAATGC GTCCATTAAC GATATTTTGA AATTTCGACG 
TGCTTTGACA TTTATGGACG AACAACATCC CTTTGGGGAT GCCTTCGGTC CTGCTGCATC 
ACGAAACGAT GTCATCAGTT CGGCGCAGCA AGTATATCAA CGCCTTTTGA AAATGACGCC 
CGAGAGTATC ATGCTGAACT GTGACGTCTT CACTATGTTG GCGGACGAAG ACGAGGGGGC 
TACCACCAAC TTGGCCAAGA GGAAGGCCCT ACGCAAGCTC TTTCGTCCCG ACGCAAACAA 
CGAGCTTTCT CAGTTGGCCT TTATTCAATC TTGCGATTCT CTGTACAAAA AGCTGCGCTT 
CTTTCGTGCT TCTGTAGGAA ACGCCTCGGT TATTGACCAT GCCCTCGAAA CTATCATCGA 
CTTTCTCTTC AACTTCATAC TGGCGCTTGC TTTGCTTTCG CTTATGCGCT TTAATCCTTG 
GCCTCTGTTG GTATCGGTTT CAACATTACT CGTGTCTGTG TCCTTTGCTG TCGGATCTAG 
TGCCAGCAAA TACATAGAAG TAAGTCACCC GTTTCAATGC CTCCGTCATT GCCCATCTCG 
TTTCTCAGGT TCATTTTCTC CATAACGTTA CAGGGCATAT TGCTGATTGC GGCAAGAAGG 
TGAGTTGTTC CCACTATTGT AGTAGCTATT TCTATCGCTT CGAAACGAAC CGTTCCTTAC 
ATTACATATG TTCATAGACC TTACGATCTT GGTGACCGCA TATACATGCT GGATCCGTCT 
GTTTTAAACA GCAACGACGG CCTTTTCTGG TCCTGGTTTA TTGAAGGTGC GATCGTGTTG 
CATTGAAAAC ACCAAATGAT CAGTTTTTTC AGTTCTTCAG CTTTCTTACT CGTCCCACTT 
CATTTGTACT TTAGATATTA ATCTTTTCCA AACCACGGTA CGCTACGCCG GTACCAACGA 
AGTGGCGACC ATCAACAACG GTTCAATTGC AAATTTACGT ATCGTAAACG CTAACCGGTC 
CCCCAACGCT GTTGTTTGGT TCCAGTTGCC TTTTCACATT TCTGTCTTGG AGGAGAAGCG 
AATGGACCGC ACCCGTGTGG CGCTCGAAAA GTACGCTCAC GCGCGTCCCC GCAGCTGGCA 
CAGTTTTTCC TATTGTCGTG TTGACGAGGT CCATGTCGAG TTGGAGAAAC TAATGGTCAC 
CATAGGCTTT CAGCACCGGA CTTCTTGGCA AGACTTGGGT CGAATTTTGA TGGACAAGGC 
CGATCTGATG TGTTATGTGT ACCAGCTGAC AAAAGATTTG GGCGTTGACT ATGAAGAGCT 
TCCACAACGT GATCTAGTAT ACTACTCGGG TTTGCTCAAG AGTGGTGGCG TGCGTAACTA 
CCGCAAGGGT CTCGTCAACC CCTTGAACAT TCAAAACTCT GTTGAAGGAG AAGTACCCAT 
CAGACAATCA TCATCGGCTG CATCTACTCG TACCAACGAT ACCGATTCGG TGAATCGCGC 
CTTTCTCGCT AATCTACGTC TTTAG 

 

Protein sequence

MKPTNTEEER QRPPTHPKST TVAPESRDAG TNYTSGVPNA TSAADPSSNA STYPPPPPPP 
YPFAVEERAG RGVLSSVEKR RQHVRTASGE QWHAAVPGER PPLGGNVPFQ RMYNSMATPP 
APMSRTSSTA SSTDEAKSAR QKFQDIARKV RMLNLVAPGN AHTNHGLTSP NGSTSGGSRG 
HRKTASRAHA LLDSIQEATE DDESRSNCGN VFFEGVGGDA LTQGESHFSV EATDADRLVA 
GAIQVEKLFA TNDTGSTSST EELQDADHDG GALPDYEEQV PLRDHNERYG SLDEFSNGGS 
KYPRRVVKKR TDRYSSKRLL RRIAKMCHPF TLLQALWHTI LHSYFVTLSL PAFVAAWVVY 
YHLGNPNLEF MPGHASVAWW LIFVGRQCIT LELARLTQWL LVDKIILGTR VAVKCLGPLP 
TLYAIQAKGW PIMLALWAIA DLFLLHGDNR FQQHWFYFTG ISIFKDANSG VYILTSPTYL 
RMLLSMLVAG LATAGKRTAV AMYFGRRTFS EFKPRLEKIL REVVLLSETA ELAQEAERVS 
YGVGQTGETL EIDLNRQDSR VQFMDDVSWT TDRNLVKNSG RGNAMDESSD DESEDRHSPA 
NLKRRRSESL NDAMMEKTES GSFRVSDLLE NWEEPVNKLD KSLNASINDI LKFRRALTFM 
DEQHPFGDAF GPAASRNDVI SSAQQVYQRL LKMTPESIML NCDVFTMLAD EDEGATTNLA 
KRKALRKLFR PDANNELSQL AFIQSCDSLY KKLRFFRASV GNASVIDHAL ETIIDFLFNF 
ILALALLSLM RFNPWPLLVS VSTLLVSVSF AVGSSASKYI EGILLIAARR PYDLGDRIYM 
LDPSVLNSND GLFWSWFIED INLFQTTVRY AGTNEVATIN NGSIANLRIV NANRSPNAVV 
WFQLPFHISV LEEKRMDRTR VALEKYAHAR PRSWHSFSYC RVDEVHVELE KLMVTIGFQH 
RTSWQDLGRI LMDKADLMCY VYQLTKDLGV DYEELPQRDL VYYSGLLKSG GVRNYRKGLV 
NPLNIQNSVE GEVPIRQSSS AASTRTNDTD SVNRAFLANL RL